RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ANKS6Q68DC2 871 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 CRTC3Q6UUV7 619 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 VSTM4Q8IW00 320 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 TRIM48Q8IWZ4 208 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 TRAM1L1Q8N609 369 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 AVL9Q8NBF6 648 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 SPATA22Q8NHS9 363 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 GLYATL1Q969I3 302 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 TRIB3Q96RU7 358 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 CTRCQ99895 268 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 TBC1D10AQ9BXI6 508 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 UBP1Q9NZI7 540 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 PDP2Q9P2J9 529 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 CPNE7Q9UBL6 633 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 ZNF711Q9Y462 761 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 A0A0A6YYK5 440 aaPredicted RBP15.19■□□□□ 0.02
TPM3-219ENST00000509409 PYCARD-AS1I3L0S3 204 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 KMOO15229 486 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 MFAP3LO75121 409 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 MTA2O94776 668 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 NDST3O95803 873 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 VIPP01282 170 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 COMTP21964 271 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 TNNT3P45378 269 aaPredicted RBP15.19■□□□□ 0.02
TPM3-219ENST00000509409 ARSDP51689 593 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 EPHA4P54764 986 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 MC2RQ01718 297 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 LLGL1Q15334 1064 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 MFSD7Q6UXD7 560 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 CEACAM20Q6UY09 585 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 ARHGAP22Q7Z5H3 698 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 ADGRG6Q86SQ4 1221 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 LRRTM4Q86VH4 590 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 GDAP1Q8TB36 358 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 TEFMQ96QE5 360 aaKnown RBP15.19■□□□□ 0.02
TPM3-219ENST00000509409 SRPK1Q96SB4 655 aaKnown RBP15.19■□□□□ 0.02
TPM3-219ENST00000509409 BPIFA1Q9NP55 256 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 DNAJC16Q9Y2G8 782 aa15.19■□□□□ 0.02
TPM3-219ENST00000509409 CFAP46Q8IYW2 2715 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 PIEZO2Q9H5I5 2752 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 PDZK1P1A8MUH7 402 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 GPR89AB7ZAQ6 455 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 MTX2O75431 263 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 CDK14O94921 469 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 GPR89BP0CG08 455 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 LIFP15018 202 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 ZNF7P17097 686 aaPredicted RBP15.18■□□□□ 0.02
TPM3-219ENST00000509409 BPIP17213 487 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 AMD1P17707 334 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 NR2C2P49116 596 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 CLCNKAP51800 687 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 DCDC1P59894 354 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 TFDP2Q14188 446 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 SEPT7Q16181 437 aaKnown RBP15.18■□□□□ 0.02
TPM3-219ENST00000509409 PDPK2PQ6A1A2 396 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 PLXDC1Q8IUK5 500 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 TFB1MQ8WVM0 346 aaKnown RBP15.18■□□□□ 0.02
TPM3-219ENST00000509409 HTR3CQ8WXA8 447 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 TEKT5Q96M29 485 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 OLFM3Q96PB7 478 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 PLEKHG4BQ96PX9 1271 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 TSPY26PQ9H489 355 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 EPB41L1Q9H4G0 881 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 SAE1Q9UBE0 346 aaPredicted RBP15.18■□□□□ 0.02
TPM3-219ENST00000509409 SLC23A2Q9UGH3 650 aa15.18■□□□□ 0.02
TPM3-219ENST00000509409 A6NCN8 305 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 AKR1B15C9JRZ8 316 aaPredicted RBP15.17■□□□□ 0.02
TPM3-219ENST00000509409 VEGFDO43915 354 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 CST8O60676 142 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 TYRP1P17643 537 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 XRCC1P18887 633 aaPredicted RBP15.17■□□□□ 0.02
TPM3-219ENST00000509409 PTPN3P26045 913 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 MAP4P27816 1152 aaKnown RBP15.17■□□□□ 0.02
TPM3-219ENST00000509409 KCNC4Q03721 635 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 GTF2H3Q13889 308 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 SLC14A2Q15849 920 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 CNGA4Q8IV77 575 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 NLGN4XQ8N0W4 816 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 SLC25A41Q8N5S1 370 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 RNF214Q8ND24 703 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 NLGN4YQ8NFZ3 816 aaPredicted RBP15.17■□□□□ 0.02
TPM3-219ENST00000509409 KIAA1143Q96AT1 154 aaPredicted RBP15.17■□□□□ 0.02
TPM3-219ENST00000509409 TADA1Q96BN2 335 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 RTP4Q96DX8 246 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 TTC25Q96NG3 672 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 ZPBPQ9BS86 351 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 SLC12A9Q9BXP2 914 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 FBXO8Q9NRD0 319 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 SCHIP1Q9P0W5 487 aaPredicted RBP15.17■□□□□ 0.02
TPM3-219ENST00000509409 TRIM10Q9UDY6 481 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 FAM153AQ9UHL3 310 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 SPO11Q9Y5K1 396 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 COL6A6A6NMZ7 2263 aa15.17■□□□□ 0.02
TPM3-219ENST00000509409 SCN8AQ9UQD0 1980 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 ZNF891A8MT65 544 aaPredicted RBP15.16■□□□□ 0.02
TPM3-219ENST00000509409 F5H423 210 aaPredicted RBP15.16■□□□□ 0.02
TPM3-219ENST00000509409 AURKAO14965 403 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 CHUKO15111 745 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 POLR1CO15160 346 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms