RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GPR63Q9BZJ6 419 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 FAM83DQ9H4H8 585 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 ZFYVE1Q9HBF4 777 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 BPIFA1Q9NP55 256 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 CASS4Q9NQ75 786 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 WDR70Q9NW82 654 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 PAK5Q9P286 719 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 LRIT1Q9P2V4 623 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNHIT2Q9UHR6 403 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 CDC23Q9UJX2 597 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 ST14Q9Y5Y6 855 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 OAS3Q9Y6K5 1087 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 DMXL2Q8TDJ6 3036 aa8.67□□□□□ -1.02
PDLIM5-213ENST00000509357 CCDC78A2IDD5 438 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 F7P08709 466 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 GLB1P16278 677 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 HLA-DPA1P20036 260 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 MSNP26038 577 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 DEKP35659 375 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ADCY8P40145 1251 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ACTR1BP42025 376 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 MAGEA3P43357 314 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 CDKN1CP49918 316 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF140P52738 457 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ACTR1AP61163 376 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 CCL7P80098 99 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 XIAPP98170 497 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 CTBSQ01459 385 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 GPS1Q13098 491 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 PTK6Q13882 451 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 MSS51Q4VC12 460 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 C14orf28Q4W4Y0 310 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 CCDC38Q502W7 563 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 C3orf38Q5JPI3 329 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF648Q5T619 568 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 RNASEH2BQ5TBB1 312 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 XKR5Q6UX68 686 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 NLRP8Q86W28 1048 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 JAMLQ86YT9 394 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 CCNJLQ8IV13 435 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 BLOC1S5Q8TDH9 187 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 GPBAR1Q8TDU6 330 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 MAIP1Q8WWC4 291 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 FGF11Q92914 225 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 GRAMD1AQ96CP6 724 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 TRIM44Q96DX7 344 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ATXN7L3BQ96GX2 97 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 NAF1Q96HR8 494 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 OR2M4Q96R27 311 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 SPATA16Q9BXB7 569 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 FRMD8Q9BZ67 464 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 STRADBQ9C0K7 418 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ZMYND15Q9H091 742 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 CDH19Q9H159 772 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 LRRN3Q9H3W5 708 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 POLR1BQ9H9Y6 1135 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 MAGEE1Q9HCI5 957 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 EPB41L5Q9HCM4 733 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ARFGAP3Q9NP61 516 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 RAD18Q9NS91 495 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 TRNAU1APQ9NX07 287 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 IL17CQ9P0M4 197 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 TAAR2Q9P1P5 351 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 SLC2A6Q9UGQ3 507 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 RALYQ9UKM9 306 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 CFAP47Q6ZTR5 3102 aa8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 KMT2BQ9UMN6 2715 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-213ENST00000509357 ZZEF1O43149 2961 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 ANKRD11Q6UB99 2663 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 TRBV23OR9-2A0A075B6M9 112 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 RGSL1A5PLK6 1076 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 MROH6A6NGR9 719 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 OR51F1A6NGY5 319 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 TMX2-CTNND1H3BSU7 103 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 AGRPO00253 132 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 ANXA9O76027 345 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 URI1O94763 535 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 STK10O94804 968 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 FGF1P05230 155 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 IVLP07476 585 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 APRTP07741 180 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 PSMA3P25788 255 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 AK4P27144 223 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 ARNTP27540 789 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 ALDH4A1P30038 563 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 FDFT1P37268 417 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 ABCG1P45844 678 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 RPL21P46778 160 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 LSSP48449 732 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 BASP1P80723 227 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 POU6F1Q14863 301 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 COL28A1Q2UY09 1125 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 TBC1D25Q3MII6 688 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 AMZ1Q400G9 498 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 UBAP2Q5T6F2 1119 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 OGFOD3Q6PK18 319 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 IGDCC3Q8IVU1 814 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 SFTPA2Q8IWL1 248 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms