RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 SCRN2Q96FV2 425 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 FSD1Q9BTV5 496 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 PREBQ9HCU5 417 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 TRPC7Q9HCX4 862 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 ZNF624Q9P2J8 865 aaPredicted RBP4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 STK39Q9UEW8 545 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 A0A1W2PPH5 198 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 A0A1W2PRG0 241 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 EIF4E1BA6NMX2 242 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 ICAM1P05362 532 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 INHBAP08476 426 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 ZNF883P0CG24 379 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 CASP6P55212 293 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 RPL7AP62424 266 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 CCNG2Q16589 344 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 PNLIPRP3Q17RR3 467 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 ZNF805Q5CZA5 627 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 LRIF1Q5T3J3 769 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 PLXDC2Q6UX71 529 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 C15orf39Q6ZRI6 1047 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 HM13Q8TCT9 377 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 TAF15Q92804 592 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 ARHGEF26Q96DR7 871 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 OXNAD1Q96HP4 312 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 EGLN2Q96KS0 407 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 C17orf77Q96MU5 243 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 RANBP17Q9H2T7 1088 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 SLC52A3Q9NQ40 469 aa4.31□□□□□ -1.72
UBE2D3-225ENST00000508476 PRAG1Q86YV5 1406 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 BLOC1S5-TXNDC5H3BN57 136 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 H3BQ06 376 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 TPD52L2O43399 206 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 SPARCP09486 303 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 CSF2RAP15509 400 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 MBTD1Q05BQ5 628 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 CSTF3Q12996 717 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 TECRLQ5HYJ1 363 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 TRPT1Q86TN4 253 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 RASGEF1CQ8N431 466 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 MORC4Q8TE76 937 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 SMARCE1Q969G3 411 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 BARHL1Q9BZE3 327 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 EGLN1Q9GZT9 426 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 KCNK7Q9Y2U2 307 aa4.3□□□□□ -1.72
UBE2D3-225ENST00000508476 PLPP2O43688 288 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 SYNCRIPO60506 623 aaKnown RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 TBX6O95947 436 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 CD48P09326 243 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 VEGFCP49767 419 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 PPIGQ13427 754 aaKnown RBP eCLIP4.29□□□□□ -1.723e-7■□□□□ 10.1
UBE2D3-225ENST00000508476 ACVR2BQ13705 512 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 PDE1CQ14123 709 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 TBCEQ15813 527 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 SEPT14Q6ZU15 432 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 PLEKHM3Q6ZWE6 761 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 TRIM58Q8NG06 486 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 DNAAF4Q8WXU2 420 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 ZKSCAN4Q969J2 545 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 FAM149B1Q96BN6 582 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 SENP5Q96HI0 755 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 C9orf78Q9NZ63 289 aaPredicted RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 B3GALT5Q9Y2C3 310 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 R3HDM2Q9Y2K5 976 aaKnown RBP4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 JRKLQ9Y4A0 524 aa4.29□□□□□ -1.72
UBE2D3-225ENST00000508476 A0A1B0GU03 582 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 A0A1B0GVC2 190 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 ANTXRLA6NF34 631 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 KRT19P08727 400 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 ERVK-10P10266 1014 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 ZNF23P17027 643 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 MCCP23508 829 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 NR2F2P24468 414 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 PRCPP42785 496 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 CCR9P51686 369 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 GNB1P62873 340 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 ZC2HC1CQ53FD0 456 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 RAB6CQ53S08 254 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 FAM53AQ6NSI3 398 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 RBMS3Q6XE24 437 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 APLFQ8IW19 511 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 DIS3L2Q8IYB7 885 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 SEMA3CQ99985 751 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 PSD2Q9BQI7 771 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 RAB6CQ9H0N0 254 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 PDZD7Q9H5P4 517 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 BICC1Q9H694 974 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 MTMR10Q9NXD2 777 aa4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 CWC15Q9P013 229 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-225ENST00000508476 KIAA1210Q9ULL0 1709 aa4.27□□□□□ -1.73
UBE2D3-225ENST00000508476 A0A0G2JNG1 304 aa4.27□□□□□ -1.73
UBE2D3-225ENST00000508476 FAM237BA0A1B0GVD1 139 aa4.27□□□□□ -1.73
UBE2D3-225ENST00000508476 A0A1W2PPI3 338 aa4.27□□□□□ -1.73
UBE2D3-225ENST00000508476 PCDH7O60245 1069 aa4.27□□□□□ -1.73
UBE2D3-225ENST00000508476 SLC25A12O75746 678 aa4.27□□□□□ -1.73
UBE2D3-225ENST00000508476 IPO7O95373 1038 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms