RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZNF148Q9UQR1 794 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 KNTC1P50748 2209 aa19.64■□□□□ 0.73
SFXN1-209ENST00000508290 A0A1W2PQM1 296 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 TCRBV7S2A1N4TA0A589 114 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 CPNE6O95741 557 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 GAS8O95995 478 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 F3P13726 295 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 MSNP26038 577 aaKnown RBP19.63■□□□□ 0.73
SFXN1-209ENST00000508290 FDFT1P37268 417 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 INHBCP55103 352 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 MAZP56270 477 aaKnown RBP19.63■□□□□ 0.73
SFXN1-209ENST00000508290 GABREP78334 506 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 CCL7P80098 99 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 GPLD1P80108 840 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 TMEM115Q12893 351 aaPredicted RBP19.63■□□□□ 0.73
SFXN1-209ENST00000508290 SQSTM1Q13501 440 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 LAMB3Q13751 1172 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 CCNG2Q16589 344 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 FAM151BQ6UXP7 276 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 SNIP1Q8TAD8 396 aaKnown RBP19.63■□□□□ 0.73
SFXN1-209ENST00000508290 HEXDCQ8WVB3 486 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.63■□□□□ 0.73
SFXN1-209ENST00000508290 EPB41L1Q9H4G0 881 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 SARS2Q9NP81 518 aaKnown RBP19.63■□□□□ 0.73
SFXN1-209ENST00000508290 THSD1Q9NS62 852 aa19.63■□□□□ 0.73
SFXN1-209ENST00000508290 DNMT3AQ9Y6K1 912 aaPredicted RBP19.63■□□□□ 0.73
SFXN1-209ENST00000508290 A0A087WV48 116 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 TAF4O00268 1085 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 ZSCAN12O43309 604 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 BRINP1O60477 761 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 PRAMEF1O95521 474 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 METTL18O95568 372 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 B4GALNT1Q00973 533 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 CHRNA6Q15825 494 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 INSCQ1MX18 579 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 TBC1D25Q3MII6 688 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 DENND5AQ6IQ26 1287 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 IYDQ6PHW0 289 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 SLC9B2Q86UD5 537 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 CCDC89Q8N998 374 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 ZNF398Q8TD17 642 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 ATG4AQ8WYN0 398 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 FGF11Q92914 225 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 ULK4Q96C45 1275 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 ATXN7L3BQ96GX2 97 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 APOL2Q9BQE5 337 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 TLR10Q9BXR5 811 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 JRKLQ9Y4A0 524 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 PLEKHM1Q9Y4G2 1056 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 ARL5AQ9Y689 179 aa19.62■□□□□ 0.73
SFXN1-209ENST00000508290 A6NCN8 305 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 RRP8O43159 456 aaKnown RBP19.61■□□□□ 0.73
SFXN1-209ENST00000508290 ZNF7P17097 686 aaPredicted RBP19.61■□□□□ 0.73
SFXN1-209ENST00000508290 RBMS1P29558 406 aaKnown RBP19.61■□□□□ 0.73
SFXN1-209ENST00000508290 PDX1P52945 283 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 GDF10P55107 478 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 MSLNQ13421 630 aaPredicted RBP19.61■□□□□ 0.73
SFXN1-209ENST00000508290 LONRF2Q1L5Z9 754 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 MAP9Q49MG5 647 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 WASH2PQ6VEQ5 465 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 PIM3Q86V86 326 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 Q8N9G6 341 aaPredicted RBP19.61■□□□□ 0.73
SFXN1-209ENST00000508290 OR4K2Q8NGD2 314 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 SLC37A2Q8TED4 501 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 WASH6PQ9NQA3 447 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 AKAP7Q9P0M2 348 aaPredicted RBP19.61■□□□□ 0.73
SFXN1-209ENST00000508290 PAK5Q9P286 719 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 TBC1D29Q9UFV1 150 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 KCNK6Q9Y257 313 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 DRG1Q9Y295 367 aaKnown RBP19.61■□□□□ 0.73
SFXN1-209ENST00000508290 PRKAB1Q9Y478 270 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 FREM2Q5SZK8 3169 aa19.61■□□□□ 0.73
SFXN1-209ENST00000508290 AGAP14A8MT82 685 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 H7C0S8 307 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 SRP72O76094 671 aaKnown RBP19.6■□□□□ 0.73
SFXN1-209ENST00000508290 MPOP05164 745 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 RALBP11234 206 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 ALDH4A1P30038 563 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 ZNF140P52738 457 aaPredicted RBP19.6■□□□□ 0.73
SFXN1-209ENST00000508290 EPHA4P54764 986 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 HHEXQ03014 270 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 ZFP36L1Q07352 338 aaKnown RBP19.6■□□□□ 0.73
SFXN1-209ENST00000508290 CDH17Q12864 832 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 NFATC2Q13469 925 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 TRA2AQ13595 282 aaKnown RBP eCLIP19.6■□□□□ 0.73
SFXN1-209ENST00000508290 GPR33Q49SQ1 333 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.6■□□□□ 0.73
SFXN1-209ENST00000508290 GPRC6AQ5T6X5 926 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 AGAP9Q5VTM2 703 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 TRAPPC5Q8IUR0 188 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 SFTPA2Q8IWL1 248 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 SLC38A3Q99624 504 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 UCK1Q9HA47 277 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 KLC4Q9NSK0 619 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 KCNK4Q9NYG8 393 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 TMPRSS11EQ9UL52 423 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 SATB2Q9UPW6 733 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 RAXQ9Y2V3 346 aa19.6■□□□□ 0.73
SFXN1-209ENST00000508290 PCYT1BQ9Y5K3 369 aaPredicted RBP19.6■□□□□ 0.73
SFXN1-209ENST00000508290 ANKRD11Q6UB99 2663 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms