RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 WDR48Q8TAF3 677 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 SCARF2Q96GP6 870 aaPredicted RBP9.28□□□□□ -0.92
DDX41-209ENST00000508279 PLEKHG4BQ96PX9 1271 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 CARD9Q9H257 536 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 RMI1Q9H9A7 625 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 UGT1A7Q9HAW7 530 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 UGT1A10Q9HAW8 530 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 UGT1A8Q9HAW9 530 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 RDH14Q9HBH5 336 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 KLC4Q9NSK0 619 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 PIH1D1Q9NWS0 290 aaKnown RBP9.28□□□□□ -0.92
DDX41-209ENST00000508279 IL17CQ9P0M4 197 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 TBC1D29Q9UFV1 150 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 RALYQ9UKM9 306 aaKnown RBP9.28□□□□□ -0.92
DDX41-209ENST00000508279 ZNF148Q9UQR1 794 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 PPP2R2CQ9Y2T4 447 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 KCTD3Q9Y597 815 aa9.28□□□□□ -0.92
DDX41-209ENST00000508279 KMT2BQ9UMN6 2715 aaPredicted RBP9.27□□□□□ -0.92
DDX41-209ENST00000508279 CCDC78A2IDD5 438 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 C5orf60A6NFR6 353 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 C2orf81A6NN90 581 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 PDZK1P1A8MUH7 402 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 NTN3O00634 580 aaPredicted RBP9.27□□□□□ -0.93
DDX41-209ENST00000508279 KMOO15229 486 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 PPM1DO15297 605 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 METTL18O95568 372 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 HGFP14210 728 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 TPH1P17752 444 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 LPOP22079 712 aaPredicted RBP9.27□□□□□ -0.93
DDX41-209ENST00000508279 MPSTP25325 297 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 AKT1P31749 480 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 CXCR5P32302 372 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 ADRA1AP35348 466 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 TMEM115Q12893 351 aaPredicted RBP9.27□□□□□ -0.93
DDX41-209ENST00000508279 NFATC2Q13469 925 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 TAF1AQ15573 450 aaPredicted RBP9.27□□□□□ -0.93
DDX41-209ENST00000508279 PARP6Q2NL67 630 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 KHDC1Q4VXA5 237 aaKnown RBP9.27□□□□□ -0.93
DDX41-209ENST00000508279 ZDHHC20Q5W0Z9 365 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 PDPK2PQ6A1A2 396 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 RANBP10Q6VN20 620 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 LRRC69Q6ZNQ3 347 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 DET1Q7L5Y6 550 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 PRUNE1Q86TP1 453 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 LRRTM4Q86VH4 590 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 JAMLQ86YT9 394 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 OR13C4Q8NGS5 318 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 SLC35B2Q8TB61 432 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 SLC37A2Q8TED4 501 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 NAT14Q8WUY8 206 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 AHCYL2Q96HN2 611 aaKnown RBP9.27□□□□□ -0.93
DDX41-209ENST00000508279 TMEM74Q96NL1 305 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 PPP1R2P1Q96PQ5 205 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 SLC38A3Q99624 504 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 STRADBQ9C0K7 418 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 POLR1BQ9H9Y6 1135 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 IL26Q9NPH9 171 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 PRDM8Q9NQV8 689 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 KCNK4Q9NYG8 393 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.27□□□□□ -0.93
DDX41-209ENST00000508279 NFKBIL1Q9UBC1 381 aaPredicted RBP9.27□□□□□ -0.93
DDX41-209ENST00000508279 DKK4Q9UBT3 224 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 FAM8A1Q9UBU6 413 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 FKBPLQ9UIM3 349 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 APPL1Q9UKG1 709 aa9.27□□□□□ -0.93
DDX41-209ENST00000508279 ANKRD11Q6UB99 2663 aaPredicted RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 CCDC187A0A096LP49 1063 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 OR2AG2A6NM03 316 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 E7EVH7 732 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 CCL22O00626 93 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 RRP8O43159 456 aaKnown RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 ZW10O43264 779 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 B4GAT1O43505 415 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 LIASO43766 372 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 VEGFDO43915 354 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 CEP104O60308 925 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 ZNF189O75820 626 aaPredicted RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 TNFSF15O95150 251 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 PRAMEF1O95521 474 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 CRTAMO95727 393 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 JMJD7P0C870 316 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 ETS1P14921 441 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 PNLIPP16233 465 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 ZNF7P17097 686 aaPredicted RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 MSH3P20585 1137 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 RPL10P27635 214 aaKnown RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 CA5AP35218 305 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 EIF2S3P41091 472 aaKnown RBP9.26□□□□□ -0.93
DDX41-209ENST00000508279 LSSP48449 732 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 PDX1P52945 283 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 B4GALNT1Q00973 533 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 HHEXQ03014 270 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 ITGA9Q13797 1035 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 POU6F1Q14863 301 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 COL28A1Q2UY09 1125 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 P3H1Q32P28 736 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 TBC1D25Q3MII6 688 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 SNAP47Q5SQN1 464 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 RAB11FIP2Q7L804 512 aa9.26□□□□□ -0.93
DDX41-209ENST00000508279 TMPRSS9Q7Z410 1059 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms