RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 FGD3Q5JSP0 725 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM182AQ5T1J6 154 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM72AQ5TYM5 149 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ANKS6Q68DC2 871 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DENND5AQ6IQ26 1287 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM72DQ6L9T8 149 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 XKR5Q6UX68 686 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 OTOP3Q7RTS5 596 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PRRT2Q7Z6L0 340 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ANKRD23Q86SG2 305 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM35AQ86V20 835 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM72BQ86X60 149 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CILP2Q8IUL8 1156 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 EPHX4Q8IUS5 362 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 HID1Q8IV36 788 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 MFSD6LQ8IWD5 586 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ADHFE1Q8IWW8 467 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CLEC4FQ8N1N0 589 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PARP8Q8N3A8 854 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 SVOPQ8N4V2 548 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM199Q8N511 208 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DPP10Q8N608 796 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PTGR2Q8N8N7 351 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 SETD9Q8NE22 299 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPR150Q8NGU9 434 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DNAJB8Q8NHS0 232 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 C1orf216Q8TAB5 229 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 BPIFB1Q8TDL5 484 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DPF3Q92784 378 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CASP10Q92851 521 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM125Q96AQ2 219 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 VPS33AQ96AX1 596 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TAMM41Q96BW9 452 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PHF21BQ96EK2 531 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 VMP1Q96GC9 406 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FBXL20Q96IG2 436 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF641Q96N77 438 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZMAT2Q96NC0 199 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCDC115Q96NT0 180 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PPP1R16BQ96T49 567 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RBM4BQ9BQ04 359 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FEM1AQ9BSK4 669 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RBM4Q9BWF3 364 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CHID1Q9BWS9 393 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CFHR5Q9BXR6 569 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 BRINP2Q9C0B6 783 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ADNPQ9H2P0 1102 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TUT1Q9H6E5 874 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ALG9Q9H6U8 611 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RUBCNLQ9H714 662 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 IL1RL2Q9HB29 575 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FANCEQ9HB96 536 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 MOV10Q9HCE1 1003 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCNB1IP1Q9NPC3 277 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 NECTIN3Q9NQS3 549 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RGS18Q9NS28 235 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 AIG1Q9NVV5 245 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RBM22Q9NW64 420 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TRNAU1APQ9NX07 287 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CMTM6Q9NX76 183 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 USE1Q9NZ43 259 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPRC5DQ9NZD1 345 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 UBP1Q9NZI7 540 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DNAJB9Q9UBS3 223 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 EGFL7Q9UHF1 273 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 POLG2Q9UHN1 485 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DAPK2Q9UIK4 370 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 C3orf18Q9UK00 162 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 BAG5Q9UL15 447 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CDH9Q9ULB4 789 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TRIM17Q9Y577 477 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 NME7Q9Y5B8 376 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DNAJC15Q9Y5T4 150 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 LTBP3Q9NS15 1303 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM149AA5PLN7 773 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 HTR3EA5X5Y0 456 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NEMP2A6NFY4 417 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SAGE2PA6NJ88 616 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 YJEFN3A6XGL0 299 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 WASH4PA8MWX3 477 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 M0R3G1 203 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARNTLO00327 626 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 UBFD1O14562 309 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 GNGT2O14610 69 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 NRP1O14786 923 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 GSTA4O15217 222 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SYNCRIPO60506 623 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAFKO60675 156 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 KERAO60938 352 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CDK14O94921 469 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PRSS23O95084 383 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 SCELO95171 688 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 FKBP9O95302 570 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 WISP3O95389 354 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 FUCA1P04066 466 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 FGF1P05230 155 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT2B4P06133 528 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 FYNP06241 537 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ALDOCP09972 364 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCDC159P0C7I6 412 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms