RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 P4HTMQ9NXG6 502 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 TNFRSF10DQ9UBN6 386 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 LHX3Q9UBR4 397 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 B4GALT6Q9UBX8 382 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 CD84Q9UIB8 345 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 COQ4Q9Y3A0 265 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 OR5K4A6NMS3 321 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 RNF212BA8MTL3 300 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 DAB1O75553 588 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 INHBBP09529 407 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 F3P13726 295 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 RHOQP17081 205 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 SERPINA4P29622 427 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 MAPKAPK2P49137 400 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 TDGF1P3P51864 188 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 PPP1CAP62136 330 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 BCL2L1Q07817 233 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 PAK1Q13153 545 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 SSPNQ14714 243 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 C3AR1Q16581 482 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 NFIL3Q16649 462 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.08□□□□□ -1.28
VCAN-207ENST00000507162 PTCHD3Q3KNS1 767 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 PPP1R15BQ5SWA1 713 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 AGAP7PQ5VUJ5 663 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 B3GNTL1Q67FW5 361 aaPredicted RBP7.08□□□□□ -1.28
VCAN-207ENST00000507162 ZNF324BQ6AW86 544 aaPredicted RBP7.08□□□□□ -1.28
VCAN-207ENST00000507162 NCCRP1Q6ZVX7 275 aaPredicted RBP7.08□□□□□ -1.28
VCAN-207ENST00000507162 HSD11B1LQ7Z5J1 315 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 SRLQ86TD4 932 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 CEP57L1Q8IYX8 460 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 DSELQ8IZU8 1212 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 ADAMTS18Q8TE60 1221 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 CPT1BQ92523 772 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 NR4A3Q92570 626 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 KCTD12Q96CX2 325 aaKnown RBP7.08□□□□□ -1.28
VCAN-207ENST00000507162 TMX3Q96JJ7 454 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 SLC41A2Q96JW4 573 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 C18orf12Q96KH6 178 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 AGAP4Q96P64 663 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 IP6K3Q96PC2 410 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 SLC7A5P2Q9GIP4 190 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 LIME1Q9H400 295 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 OSGEPL1Q9H4B0 414 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 ATP13A3Q9H7F0 1226 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 METTL14Q9HCE5 456 aaKnown RBP7.08□□□□□ -1.28
VCAN-207ENST00000507162 ACP6Q9NPH0 428 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 SCHIP1Q9P0W5 487 aaPredicted RBP7.08□□□□□ -1.28
VCAN-207ENST00000507162 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
VCAN-207ENST00000507162 SEC14L3Q9UDX4 400 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 OR12D3Q9UGF7 316 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 STAP1Q9ULZ2 295 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 VPS13CQ709C8 3753 aa7.08□□□□□ -1.28
VCAN-207ENST00000507162 UBA6A0AVT1 1052 aaPredicted RBP7.07□□□□□ -1.28
VCAN-207ENST00000507162 C2orf72A6NCS6 295 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 C9J4A7 227 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 K7ELQ4 463 aaPredicted RBP7.07□□□□□ -1.28
VCAN-207ENST00000507162 CETN3O15182 167 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 WIPF1O43516 503 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 ATP1A1P05023 1023 aaKnown RBP7.07□□□□□ -1.28
VCAN-207ENST00000507162 HEXAP06865 529 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 CAPN1P07384 714 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 SLC19A1P41440 591 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 DGKQP52824 942 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 UBE2IP63279 158 aaKnown RBP7.07□□□□□ -1.28
VCAN-207ENST00000507162 TUBB4BP68371 445 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 TUBB2AQ13885 445 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 CNGA3Q16281 694 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 CYP2A13Q16696 494 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 IRAK1BP1Q5VVH5 260 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 CES4AQ5XG92 561 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 SHC4Q6S5L8 630 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 OLFML1Q6UWY5 402 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 LINC00696Q6ZRV3 163 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 RFLNAQ6ZTI6 216 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 NLRP14Q86W24 1093 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 FAM131BQ86XD5 332 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 PASD1Q8IV76 773 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 SYTL1Q8IYJ3 562 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 WDTC1Q8N5D0 677 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 DNAAF3Q8N9W5 541 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 AVL9Q8NBF6 648 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 CA5BP1Q8WTZ4 195 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 UBXN4Q92575 508 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 DTD2Q96FN9 168 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 TAAR6Q96RI8 345 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 TUBGCP5Q96RT8 1024 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 MAP3K3Q99759 626 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 NDC1Q9BTX1 674 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 TUBB2BQ9BVA1 445 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 MAGEB5Q9BZ81 275 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 EPS8L2Q9H6S3 715 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 UCK1Q9HA47 277 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 TMEM248Q9NWD8 314 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 KCTD5Q9NXV2 234 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 UBA2Q9UBT2 640 aaPredicted RBP7.07□□□□□ -1.28
VCAN-207ENST00000507162 TINAGQ9UJW2 476 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 PLEKHA6Q9Y2H5 1048 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 PADI2Q9Y2J8 665 aa7.07□□□□□ -1.28
VCAN-207ENST00000507162 SIK3Q9Y2K2 1263 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms