RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 CHID1Q9BWS9 393 aa9.53□□□□□ -0.88
PHF3-208ENST00000506783 POLR1EQ9GZS1 481 aaKnown RBP9.53□□□□□ -0.88
PHF3-208ENST00000506783 ACTR8Q9H981 624 aa9.53□□□□□ -0.88
PHF3-208ENST00000506783 CRLS1Q9UJA2 301 aa9.53□□□□□ -0.88
PHF3-208ENST00000506783 COMMD3-BMI1R4GMX3 469 aa9.53□□□□□ -0.88
PHF3-208ENST00000506783 TMEM114B3SHH9 223 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 PRRG1O14668 218 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 HTRA2O43464 458 aaPredicted RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 CKMP06732 381 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 PTNP21246 168 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 HNF4AP41235 474 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 KPNA1P52294 538 aaPredicted RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 RHOAP61586 193 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 FAM187BQ17R55 369 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 C17orf99Q6UX52 265 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 KCTD8Q6ZWB6 473 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SCD5Q86SK9 330 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ISCA2Q86U28 154 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 CILP2Q8IUL8 1156 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ARHGAP12Q8IWW6 846 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 CMTR2Q8IYT2 770 aaKnown RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 KRTCAP2Q8N6L1 136 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 MUS81Q96NY9 551 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 UNC93B1Q9H1C4 597 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 C1orf21Q9H246 121 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SRRDQ9UH36 339 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SPO11Q9Y5K1 396 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 COL2A1P02458 1487 aaPredicted RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 C2orf81A6NN90 581 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 TBKBP1A7MCY6 615 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 A8MU76 341 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ARPC2O15144 300 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SEPT4O43236 478 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 DUSP11O75319 330 aaKnown RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 ECI2O75521 394 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 G6PDP11413 515 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 MYL4P12829 197 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 PPP3CCP48454 512 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 NR1H2P55055 460 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 OR4D2P58180 307 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ZNF177Q13360 481 aaPredicted RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 CDH18Q13634 790 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 MEP1AQ16819 746 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 FAM174BQ3ZCQ3 159 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 UNC50Q53HI1 259 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 MS4A13Q5J8X5 152 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 STEAP4Q687X5 459 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 POTEHQ6S545 545 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ZNF621Q6ZSS3 439 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SETD3Q86TU7 594 aaPredicted RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 OR2T34Q8NGX1 318 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 OR2T3Q8NH03 318 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 MED8Q96G25 268 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ANKRD27Q96NW4 1050 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 BOCQ9BWV1 1114 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ASB8Q9H765 288 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 GID8Q9NWU2 228 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ZNF229Q9UJW7 825 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 EYSQ5T1H1 3165 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 COL11A1P12107 1806 aaPredicted RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 PTPRFP10586 1907 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 LOC100506127A0A0U1RQW1 187 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SMIM30A4D0T7 59 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SAP18O00422 153 aaKnown RBP9.52□□□□□ -0.89
PHF3-208ENST00000506783 VILLO15195 856 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 F2P00734 622 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SERPIND1P05546 499 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 GSK3BP49841 420 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 CHRNB3Q05901 458 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SLC15A3Q8IY34 581 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 CIPCQ9C0C6 399 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 SELENONQ9NZV5 590 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 POLG2Q9UHN1 485 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 ADAM28Q9UKQ2 775 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 RNF11Q9Y3C5 154 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 TRPV2Q9Y5S1 764 aa9.52□□□□□ -0.89
PHF3-208ENST00000506783 TRIOO75962 3097 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 BCAS2O75934 225 aaPredicted RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 STATHP02808 62 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 WARSP23381 471 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 MLLT6P55198 1093 aaPredicted RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 SQLEQ14534 574 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 ZNF648Q5T619 568 aaPredicted RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 DENND5AQ6IQ26 1287 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 GALNT18Q6P9A2 607 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 UBE2J2Q8N2K1 259 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 C12orf43Q96C57 262 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 LRRC58Q96CX6 371 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 CDKN2AIPNLQ96HQ2 116 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 SERPINB11Q96P15 392 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 TMEM39AQ9NV64 488 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 TBC1D13Q9NVG8 400 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 RPL26L1Q9UNX3 145 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 VPS26AO75436 327 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 SLC22A3O75751 556 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 H6PDO95479 791 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms