RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ORAI3Q9BRQ5 295 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 SPATA16Q9BXB7 569 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 GPR174Q9BXC1 333 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 TEX101Q9BY14 249 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 DUSP15Q9H1R2 295 aaPredicted RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 P2RY12Q9H244 342 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 RHOJQ9H4E5 214 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 CXorf56Q9H5V9 222 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 C6orf106Q9H6K1 298 aaPredicted RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 EBF2Q9HAK2 575 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A7Q9HAW7 530 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A10Q9HAW8 530 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A8Q9HAW9 530 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 C11orf16Q9NQ32 467 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PPANQ9NQ55 473 aaKnown RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 MBNL1Q9NR56 388 aaKnown RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 ZDHHC3Q9NYG2 299 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 LGALS13Q9UHV8 139 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 VPS9D1Q9Y2B5 631 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PSAT1Q9Y617 370 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 COMMD10Q9Y6G5 202 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UNC13CQ8NB66 2214 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 A0A1W2PPC4 97 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 HMX2A2RU54 273 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 PRR23AA6NEV1 266 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 FAM47DPA6NHR8 397 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 PRR33A8MZF0 331 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 POC1B-GALNT4F8VUJ3 575 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 PRAMEF26H0Y7S4 382 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 K7ESM1 405 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 RAD51BO15315 384 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 GPR39O43194 453 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 NDUFS2O75306 463 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 NDUFS3O75489 264 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 PIAS1O75925 651 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 INHBAP08476 426 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 ZNF7P17097 686 aaPredicted RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 PMLP29590 882 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 MAT2AP31153 395 aaKnown RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 CNR2P34972 360 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 IGFALSP35858 605 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 NSG1P42857 185 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 FNTBP49356 437 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 CSRP3P50461 194 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 LIMK2P53671 638 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 YPEL5P62699 121 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 MPP1Q00013 466 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 B4GALNT1Q00973 533 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 CSTF1Q05048 431 aaKnown RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 IFFO1Q0D2I5 559 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 DNAJC3Q13217 504 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 IRF4Q15306 451 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 ZNF789Q5FWF6 425 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 GPRC6AQ5T6X5 926 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 C1QTNF12Q5T7M4 302 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 RAET1GQ6H3X3 334 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 CNSTQ6PJW8 725 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 TSSK4Q6SA08 328 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 TIFABQ6ZNK6 161 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 TAS2R42Q7RTR8 314 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 STRA8Q7Z7C7 330 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 LDB1Q86U70 411 aaPredicted RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 C11orf74Q86VG3 221 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 PHYKPLQ8IUZ5 450 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 RBFAQ8N0V3 343 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 TMEM145Q8NBT3 493 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 EPS8L3Q8TE67 593 aaKnown RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 MZB1Q8WU39 189 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 GAB3Q8WWW8 586 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 DNASE2BQ8WZ79 361 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 KLK6Q92876 244 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 FOXJ1Q92949 421 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 ISL2Q96A47 359 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 MTBPQ96DY7 904 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 CCDC97Q96F63 343 aaPredicted RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 PGM2Q96G03 612 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 HIC2Q96JB3 615 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 BMFQ96LC9 184 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 BIRC8Q96P09 236 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 GPR22Q99680 433 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 SH3GL2Q99962 352 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 APOOQ9BUR5 198 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 COL25A1Q9BXS0 654 aaPredicted RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 FAM96AQ9H5X1 160 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 TRIM39Q9HCM9 518 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 FBXO6Q9NRD1 293 aaPredicted RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 LATS2Q9NRM7 1088 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 GPR27Q9NS67 375 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 TXNDC16Q9P2K2 825 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 SLC17A6Q9P2U8 582 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 PSMC3IPQ9P2W1 217 aaPredicted RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 CRLS1Q9UJA2 301 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 SUFUQ9UMX1 484 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.13□□□□□ -1.27
NUP54-204ENST00000506098 PCDHB1Q9Y5F3 818 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 IKBKGQ9Y6K9 419 aa7.13□□□□□ -1.27
NUP54-204ENST00000506098 RP1P56715 2156 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 IQANK1A0A1B0GTG1 560 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 POM121BA6NF01 834 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 GOLGA8CPA6NN73 597 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms