RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 TCEAL1Q15170 157 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 TBR1Q16650 682 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 TEX44Q53QW1 395 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 ALS2CLQ60I27 953 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 ANKS6Q68DC2 871 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 CEACAM20Q6UY09 585 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 ARHGAP22Q7Z5H3 698 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 ADGRG6Q86SQ4 1221 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 PLXDC1Q8IUK5 500 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 PMEPA1Q969W9 287 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 OSGEPL1Q9H4B0 414 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 UCK1Q9HA47 277 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 FBXO8Q9NRD0 319 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 KLC4Q9NSK0 619 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 ZNF711Q9Y462 761 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 ADGRG1Q9Y653 693 aa11.91□□□□□ -0.5
PDLIM7-214ENST00000505746 LILRA5A6NI73 299 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 CHUKO15111 745 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 KMOO15229 486 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 CAPN5O15484 640 aaPredicted RBP11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 SPOPO43791 374 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 RAD1O60671 282 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 MT-CYBP00156 380 aaPredicted RBP11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 VIPP01282 170 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 SLC4A1P02730 911 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 TNNT1P13805 278 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 BPIP17213 487 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 XRCC1P18887 633 aaPredicted RBP11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 MAP4P27816 1152 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 CYP4F2P78329 520 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 INSCQ1MX18 579 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 ZNF648Q5T619 568 aaPredicted RBP11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 LRRTM4Q86VH4 590 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 TRIM48Q8IWZ4 208 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 BMPERQ8N8U9 685 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 SPATA22Q8NHS9 363 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 TFB1MQ8WVM0 346 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 RTP4Q96DX8 246 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 TEKT5Q96M29 485 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 PLEKHG4BQ96PX9 1271 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 EFHD1Q9BUP0 239 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 TBC1D10AQ9BXI6 508 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 SLC12A9Q9BXP2 914 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 TRABDQ9H4I3 376 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 ARFGAP3Q9NP61 516 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.5
PDLIM7-214ENST00000505746 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 MTSS1O43312 755 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 CST8O60676 142 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 PMPCBO75439 489 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 CDK14O94921 469 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 LIFP15018 202 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 ZNF7P17097 686 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 COMTP21964 271 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 PTPN3P26045 913 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 CDKN2BP42772 138 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 NOP2P46087 812 aaKnown RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 UBE2IP63279 158 aaKnown RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 PRKD1Q15139 912 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 TAZQ16635 292 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 ZDHHC20Q5W0Z9 365 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 BORAQ6PGQ7 559 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 CRTC3Q6UUV7 619 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 MFSD7Q6UXD7 560 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 B4GALNT4Q76KP1 1039 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 PRICKLE2Q7Z3G6 844 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 NLGN4XQ8N0W4 816 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 NLGN4YQ8NFZ3 816 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 HTR3CQ8WXA8 447 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 P3H4Q92791 437 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 KIAA1143Q96AT1 154 aaPredicted RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 VPS35Q96QK1 796 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 TIMM29Q9BSF4 260 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 TRIT1Q9H3H1 467 aaKnown RBP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 TSPY26PQ9H489 355 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 STARD5Q9NSY2 213 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 KLHL3Q9UH77 587 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 FAM153AQ9UHL3 310 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 PILRAQ9UKJ1 303 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 HYOU1Q9Y4L1 999 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 ATMQ13315 3056 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 KIF26BQ2KJY2 2108 aa11.89□□□□□ -0.51
PDLIM7-214ENST00000505746 GCN1Q92616 2671 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 LOC285095A0A1B0GVY8 99 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 ZNF891A8MT65 544 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 PDZK1P1A8MUH7 402 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 POLR1CO15160 346 aaPredicted RBP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 PSTPIP1O43586 416 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 KCNJ13O60928 360 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 PPFIA2O75334 1257 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 UBXN7O94888 489 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 EPOP01588 193 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 ANKRD34CP0C6C1 535 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 AMD1P17707 334 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 VCLP18206 1134 aa11.88□□□□□ -0.51
PDLIM7-214ENST00000505746 ITGB6P18564 788 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms