RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GALNT13Q8IUC8 556 aa13□□□□□ -0.33
DDX41-204ENST00000504807 RHOT2Q8IXI1 618 aa13□□□□□ -0.33
DDX41-204ENST00000504807 RHOT1Q8IXI2 618 aa13□□□□□ -0.33
DDX41-204ENST00000504807 SFRP1Q8N474 314 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ZSCAN1Q8NBB4 408 aa13□□□□□ -0.33
DDX41-204ENST00000504807 HAUS1Q96CS2 278 aa13□□□□□ -0.33
DDX41-204ENST00000504807 CDH19Q9H159 772 aa13□□□□□ -0.33
DDX41-204ENST00000504807 FAM83DQ9H4H8 585 aa13□□□□□ -0.33
DDX41-204ENST00000504807 GLOD4Q9HC38 313 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ZNHIT6Q9NWK9 470 aaKnown RBP13□□□□□ -0.33
DDX41-204ENST00000504807 KCTD5Q9NXV2 234 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ZNHIT2Q9UHR6 403 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ACSL6Q9UKU0 697 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ZNF711Q9Y462 761 aa13□□□□□ -0.33
DDX41-204ENST00000504807 ALG6Q9Y672 507 aa13□□□□□ -0.33
DDX41-204ENST00000504807 SPENQ96T58 3664 aaKnown RBP12.99□□□□□ -0.33
DDX41-204ENST00000504807 hCG_1818297A0A087WSY0 165 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 A1L4Q6 167 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 PRR19A6NJB7 356 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 PMPCBO75439 489 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 AGFG2O95081 481 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 LCA5LO95447 670 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 ASMTLO95671 621 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 CPNE6O95741 557 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 THRAP10827 490 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 BPIP17213 487 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 NFKB1P19838 968 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 EIF3IQ13347 325 aaKnown RBP12.99□□□□□ -0.33
DDX41-204ENST00000504807 SKOR2Q2VWA4 1001 aaPredicted RBP12.99□□□□□ -0.33
DDX41-204ENST00000504807 MANEAQ5SRI9 462 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 KAZNQ674X7 775 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 ADGRG6Q86SQ4 1221 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 DTX1Q86Y01 620 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 ZNF547Q8IVP9 402 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 JPH3Q8WXH2 748 aaPredicted RBP12.99□□□□□ -0.33
DDX41-204ENST00000504807 OXNAD1Q96HP4 312 aaPredicted RBP12.99□□□□□ -0.33
DDX41-204ENST00000504807 STRADBQ9C0K7 418 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 SLC25A51Q9H1U9 297 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 BPIFA1Q9NP55 256 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 OCIAD1Q9NX40 245 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 VPS18Q9P253 973 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 LCMT1Q9UIC8 334 aa12.99□□□□□ -0.33
DDX41-204ENST00000504807 REXO2Q9Y3B8 237 aaKnown RBP12.99□□□□□ -0.33
DDX41-204ENST00000504807 UNC13CQ8NB66 2214 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 ZFHX3Q15911 3703 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 A0A0U1RQJ8 604 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 GAPDHSO14556 408 aaPredicted RBP12.98□□□□□ -0.33
DDX41-204ENST00000504807 NVLO15381 856 aaKnown RBP12.98□□□□□ -0.33
DDX41-204ENST00000504807 NUAK1O60285 661 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 CST8O60676 142 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 JMJD7P0C870 316 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 PTMSP20962 102 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 NFKBIAP25963 317 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 ELAVL4P26378 380 aaKnown RBP12.98□□□□□ -0.33
DDX41-204ENST00000504807 TNFRSF8P28908 595 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 FASLGP48023 281 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 LIMK2P53671 638 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 CDK18Q07002 472 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 KCNAB2Q13303 367 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 NFATC2Q13469 925 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 OLIG2Q13516 323 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 PTPRCAPQ14761 206 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 PDK1Q15118 436 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 PLA2G4EQ3MJ16 856 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 TEX44Q53QW1 395 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 IYDQ6PHW0 289 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 SARM1Q6SZW1 724 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 NT5DC3Q86UY8 548 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 PIM3Q86V86 326 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 NDUFAF2Q8N183 169 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 TTC30BQ8N4P2 665 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.98□□□□□ -0.33
DDX41-204ENST00000504807 NAT14Q8WUY8 206 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 RNF31Q96EP0 1072 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
DDX41-204ENST00000504807 OR2AG1Q9H205 316 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 ADNPQ9H2P0 1102 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 ZFYVE1Q9HBF4 777 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 PRDM8Q9NQV8 689 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 OGFRQ9NZT2 677 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 ANAPC2Q9UJX6 822 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 INTUQ9ULD6 942 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 DUSP10Q9Y6W6 482 aa12.98□□□□□ -0.33
DDX41-204ENST00000504807 ZFC3H1O60293 1989 aaKnown RBP12.98□□□□□ -0.33
DDX41-204ENST00000504807 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 LOC285095A0A1B0GVY8 99 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 BUD23O43709 281 aaKnown RBP12.97□□□□□ -0.33
DDX41-204ENST00000504807 SPOPO43791 374 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 SNX2O60749 519 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 LIPCP11150 499 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 SLC1A1P43005 524 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 MAGEA1P43355 309 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 GPR3P46089 330 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 HADHBP55084 474 aaKnown RBP12.97□□□□□ -0.33
DDX41-204ENST00000504807 SQSTM1Q13501 440 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 CRTC3Q6UUV7 619 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 C11orf96Q7Z7L8 435 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms