RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 SLCO4A1Q96BD0 722 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 CCDC126Q96EE4 140 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 CEP295NLQ96MC4 621 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 ZNF512Q96ME7 567 aaPredicted RBP6.99□□□□□ -1.29
SNX25-202ENST00000504273 ARPC5LQ9BPX5 153 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 DDX50Q9BQ39 737 aaKnown RBP6.99□□□□□ -1.29
SNX25-202ENST00000504273 RETREG1Q9H6L5 497 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 AKTIPQ9H8T0 292 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 RC3H2Q9HBD1 1191 aaKnown RBP6.99□□□□□ -1.29
SNX25-202ENST00000504273 MAP10Q9P2G4 905 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 AFF4Q9UHB7 1163 aaKnown RBP6.99□□□□□ -1.29
SNX25-202ENST00000504273 FKBPLQ9UIM3 349 aa6.99□□□□□ -1.29
SNX25-202ENST00000504273 PTPRZ1P23471 2315 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 EPG5Q9HCE0 2579 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 PRSS51A0A1B0GVH4 220 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 CLDN11O75508 207 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 BCAS2O75934 225 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 SUPT7LO94864 414 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ADRB1P08588 477 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 IRF1P10914 325 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 CSF2RAP15509 400 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ZNF24P17028 368 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 PRDX3P30048 256 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 KPNA2P52292 529 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 KLC1Q07866 573 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 USP41Q3LFD5 358 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 C6orf163Q5TEZ5 329 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 REP15Q6BDI9 236 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 C16orf89Q6UX73 402 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 LRRC43Q8N309 656 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ZNF461Q8TAF7 563 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 SNRNP27Q8WVK2 155 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 JADE3Q92613 823 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 KIAA1191Q96A73 305 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 FUBP1Q96AE4 644 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 TUBGCP5Q96RT8 1024 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 CINPQ9BW66 212 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 MRPL9Q9BYD2 267 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 TFB2MQ9H5Q4 396 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 IL21Q9HBE4 155 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 BPIFA1Q9NP55 256 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 INTS10Q9NVR2 710 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 CACNA2D2Q9NY47 1150 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 CLEC4EQ9ULY5 219 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 RAI2Q9Y5P3 530 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ANKRD66B4E2M5 251 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 K7ERQ8 282 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ECI2O75521 394 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ZNF821O75541 412 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 RHOCP08134 193 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 SLC11A2P49281 568 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 AGTR2P50052 363 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 PLD1Q13393 1074 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 CDKN3Q16667 212 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 MRNIPQ6NTE8 343 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 UGT3A1Q6NUS8 523 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 KLC3Q6P597 504 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 Q6ZNB5 142 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 DEFB128Q7Z7B8 93 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 SETD3Q86TU7 594 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 HERC6Q8IVU3 1022 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 TMEM102Q8N9M5 508 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 NAT14Q8WUY8 206 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 AUTS2Q8WXX7 1259 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ZNF689Q96CS4 500 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 TRMT2BQ96GJ1 504 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 SAMD11Q96NU1 681 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 DERL2Q9GZP9 239 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 TRPC7Q9HCX4 862 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 UTP6Q9NYH9 597 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 YIPF1Q9Y548 306 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 ASB3Q9Y575 518 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 PRRC2BQ5JSZ5 2229 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 FAM208BQ5VWN6 2430 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 PRORSD1PA6NEY8 169 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 CBX4O00257 560 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 UBDO15205 165 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 CFLARO15519 480 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 NIPSNAP2O75323 286 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 TMCC1O94876 653 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 LYNP07948 512 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 TUFMP49411 452 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 SQLEQ14534 574 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 TSNQ15631 228 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 PFKFB4Q16877 469 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 AGKQ53H12 422 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 C6orf10Q5SRN2 563 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 GLT6D1Q7Z4J2 308 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 RYBPQ8N488 228 aaPredicted RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 PDZD8Q8NEN9 1154 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 LPCAT1Q8NF37 534 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 EXT2Q93063 718 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 FAR2Q96K12 515 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 GPR21Q99679 349 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 PKP2Q99959 881 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 GPATCH1Q9BRR8 931 aaKnown RBP6.98□□□□□ -1.29
SNX25-202ENST00000504273 PCDHAC1Q9H158 963 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 P2RY12Q9H244 342 aa6.98□□□□□ -1.29
SNX25-202ENST00000504273 EFCAB1Q9HAE3 211 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms