RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CLCN3P51790 818 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 FAAP100Q0VG06 881 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 TRAF2Q12933 501 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 CLN3Q13286 438 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 SERINC3Q13530 473 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF273Q14593 569 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 MAPKAPK3Q16644 382 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 NFIL3Q16649 462 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ZIK1Q3SY52 487 aaPredicted RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ZRANB3Q5FWF4 1079 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ITPRIPL1Q6GPH6 555 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ACAD10Q6JQN1 1059 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 MFSD7Q6UXD7 560 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 NIPA1Q7RTP0 329 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 HDDC2Q7Z4H3 204 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 GPAT4Q86UL3 456 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ZFAND4Q86XD8 727 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 MFSD4AQ8N468 514 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 UXS1Q8NBZ7 420 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 FBXO15Q8NCQ5 510 aaPredicted RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 OR9A1PQ8NGU1 263 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 OR8K3Q8NH51 312 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 HASPINQ8TF76 798 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 PTP4A1Q93096 173 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 TRIM43Q96BQ3 446 aaPredicted RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 FBXL8Q96CD0 374 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 FCRL4Q96PJ5 515 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 BDH2Q9BUT1 245 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 DGCR6LQ9BY27 220 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 MAGEB5Q9BZ81 275 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 SHARPINQ9H0F6 387 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM245Q9H330 911 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 SUV39H2Q9H5I1 410 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 RPF2Q9H7B2 306 aaKnown RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 FBXO6Q9NRD1 293 aaPredicted RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 CREBZFQ9NS37 354 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 MAT2BQ9NZL9 334 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 PAK5Q9P286 719 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 IGSF9Q9P2J2 1179 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 SPASTQ9UBP0 616 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF212Q9UDV6 495 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 DNPEPQ9ULA0 475 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 ENTPD4Q9Y227 616 aa3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 EIF3LQ9Y262 564 aaKnown RBP3.65□□□□□ -1.82
PCDH11X-208ENST00000504220 MYO10Q9HD67 2058 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM237BA0A1B0GVD1 139 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 PRSS44E7EML9 344 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 O00370 1275 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SERPINI2O75830 405 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF682O95780 498 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 GH1P01241 217 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ADSSP30520 456 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 RRM2P31350 389 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 FBXW4P57775 412 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ACTR1AP61163 376 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 INCA1Q0VD86 236 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ITGADQ13349 1161 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 BFSP2Q13515 415 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 VGLL4Q14135 290 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 PIGHQ14442 188 aaPredicted RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 IRF4Q15306 451 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CLEC16AQ2KHT3 1053 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 DDI2Q5TDH0 399 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 RNF219Q5W0B1 726 aaPredicted RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 LRFN4Q6PJG9 635 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 TTC7BQ86TV6 843 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C12orf56Q8IXR9 622 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SPATA20Q8TB22 786 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF398Q8TD17 642 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 RXFP2Q8WXD0 754 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SHC3Q92529 594 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 JADE3Q92613 823 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C18orf25Q96B23 403 aaPredicted RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 OMA1Q96E52 524 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC45A3Q96JT2 553 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ZBTB45Q96K62 511 aaPredicted RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 LGMNQ99538 433 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CDC6Q99741 560 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ALOXE3Q9BYJ1 711 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 NCOR1P1Q9H4R4 102 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 BRD7Q9NPI1 651 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 POLE3Q9NRF9 147 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPL39Q9NYK5 338 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 TJP2Q9UDY2 1190 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CPA4Q9UI42 421 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 GNPTGQ9UJJ9 305 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CDY2AQ9Y6F7 541 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CDY1Q9Y6F8 540 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 HSPE1-MOB4S4R3N1 261 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C15orf38-AP3S2A0A0A6YYH1 394 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 A0A0U1RQV5 110 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ATP6AP2A0A1C7CYW4 349 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 A0A1W2PQJ5 194 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 PIPSLA2A3N6 862 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 RAB19A4D1S5 217 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C16orf96A6NNT2 1141 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 F8VP50 259 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 F8W810 466 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CLDN4O14493 209 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C2CD2LO14523 706 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms