RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TEX35Q5T0J7 233 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANO1Q5XXA6 986 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ADALQ6DHV7 355 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 THOC7Q6I9Y2 204 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CAVIN1Q6NZI2 390 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 C19orf48Q6RUI8 117 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 KDELC1Q6UW63 502 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMCO3Q6UWJ1 677 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 KSR2Q6VAB6 950 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 PPP1R21Q6ZMI0 780 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 BTN2A1Q7KYR7 527 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SHFQ7M4L6 423 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 NLRP9Q7RTR0 991 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMEM110Q86TL2 294 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 GTSCR1Q86UQ5 136 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MON1AQ86VX9 555 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 NLRP14Q86W24 1093 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZC3HC1Q86WB0 502 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SFTPA2Q8IWL1 248 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CEP57L1Q8IYX8 460 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SCYL3Q8IZE3 742 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC7A5P1Q8MH63 180 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMEM57Q8N5G2 664 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 RNF10Q8N5U6 811 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 TRIML2Q8N7C3 387 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF527Q8NB42 609 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZMIZ2Q8NF64 920 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 IL17REQ8NFR9 667 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 DMBX1Q8NFW5 382 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 FBXO30Q8TB52 745 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 LNX1Q8TBB1 728 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 NCSTNQ92542 709 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARHGAP45Q92619 1136 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 TANKQ92844 425 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SMARCE1Q969G3 411 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC35B4Q969S0 331 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 GCC1Q96CN9 775 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 C11orf24Q96F05 449 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 COG3Q96JB2 828 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CNDP2Q96KP4 475 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SPATA17Q96L03 361 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ART5Q96L15 291 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 C3orf30Q96M34 536 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 C16orf45Q96MC5 204 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 COG8Q96MW5 612 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 RBM14Q96PK6 669 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 TSGA13Q96PP4 275 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 GAL3ST1Q99999 423 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 UPF3BQ9BZI7 483 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 NACAP1Q9BZK3 213 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 INTS2Q9H0H0 1204 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 NT5C3AQ9H0P0 336 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MMADHCQ9H3L0 296 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CENPHQ9H3R5 247 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MROH8Q9H579 483 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF696Q9H7X3 374 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 VPS37BQ9H9H4 285 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARFGAP3Q9NP61 516 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 OBP2BQ9NPH6 170 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 FANCFQ9NPI8 374 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 FKBP14Q9NWM8 211 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANKRD10Q9NXR5 420 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 C9orf78Q9NZ63 289 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 KIF17Q9P2E2 1029 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 NLKQ9UBE8 527 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MTRF1LQ9UGC7 380 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 CIDEBQ9UHD4 219 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLCO3A1Q9UIG8 710 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATPIF1Q9UII2 106 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 FBXL5Q9UKA1 691 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 PAIP2BQ9ULR5 123 aaKnown RBP2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 SATB2Q9UPW6 733 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ZNF711Q9Y462 761 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 ANGPTL3Q9Y5C1 460 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 PRSS21Q9Y6M0 314 aa2.04□□□□□ -2.08
HMGB3P17-201ENST00000504195 MROH5Q6ZUA9 1318 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ARPC4-TTLL3A0A0A6YYG9 625 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 A0A0G2JPF8 293 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CPED1A4D0V7 1026 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TMEM221A6NGB7 291 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 CCDC169A6NNP5 214 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 LGALS16A8MUM7 142 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RSPH10B2B2RC85 870 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 HNRNPCL3B7ZW38 293 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 EBAG9O00559 213 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 LIN7AO14910 233 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 WDR46O15213 610 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 NVLO15381 856 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RNF113AO15541 343 aaKnown RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ATP8B1O43520 1251 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 SLC25A17O43808 307 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 TSPAN3O60637 253 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 KLHL41O60662 606 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RTN2O75298 545 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 RPS6KA5O75582 802 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 NEBLO76041 1014 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 SNX4O95219 450 aa2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 ECDO95905 644 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P17-201ENST00000504195 SERPINC1P01008 464 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms