RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ZSCAN1Q8NBB4 408 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 AVL9Q8NBF6 648 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 AGBL5Q8NDL9 886 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 RCBTB1Q8NDN9 531 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 BRSK1Q8TDC3 778 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 SLC37A2Q8TED4 501 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 HTR3CQ8WXA8 447 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 GLYATL1Q969I3 302 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 RBM41Q96IZ5 413 aaKnown RBP11.82□□□□□ -0.52
MED28-203ENST00000503945 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 NUDT22Q9BRQ3 303 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 HERPUD2Q9BSE4 406 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 HEMGNQ9BXL5 484 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ZMYND15Q9H091 742 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 TRABDQ9H4I3 376 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 SARS2Q9NP81 518 aaKnown RBP11.82□□□□□ -0.52
MED28-203ENST00000503945 KLC4Q9NSK0 619 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.82□□□□□ -0.524e-6■■■□□ 15.8
MED28-203ENST00000503945 KLHL8Q9P2G9 620 aaPredicted RBP11.82□□□□□ -0.52
MED28-203ENST00000503945 TRHDEQ9UKU6 1024 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 KCNK6Q9Y257 313 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ZNF711Q9Y462 761 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ANKRD36A6QL64 1941 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ARHGEF17Q96PE2 2063 aaPredicted RBP11.82□□□□□ -0.52
MED28-203ENST00000503945 KIR2DS5A0A0G2JLQ3 304 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 A0A0G2JNG1 304 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 LOC285095A0A1B0GVY8 99 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 KIR2DS3K7RE56 304 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 KMOO15229 486 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 VEGFDO43915 354 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 WISP1O95388 367 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 SLC4A1P02730 911 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 LIPCP11150 499 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 CCL4P13236 92 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 F3P13726 295 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 PECAM1P16284 738 aaPredicted RBP11.81□□□□□ -0.52
MED28-203ENST00000503945 BPIP17213 487 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 CETN2P41208 172 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 CLCNKAP51800 687 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 WNT3AP56704 352 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 DCDC1P59894 354 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 COPS2P61201 443 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 ADCY2Q08462 1091 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 WASHC5Q12768 1159 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 XRCC4Q13426 336 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 NFATC2Q13469 925 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 KIR2DS5Q14953 304 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 C16orf72Q14CZ0 275 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 ZNF569Q5MCW4 686 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 MANEAQ5SRI9 462 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 ZNF648Q5T619 568 aaPredicted RBP11.81□□□□□ -0.52
MED28-203ENST00000503945 WDR74Q6RFH5 385 aaPredicted RBP11.81□□□□□ -0.52
MED28-203ENST00000503945 ADGRG6Q86SQ4 1221 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 ZFAND4Q86XD8 727 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 SLC25A41Q8N5S1 370 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 GDAP1Q8TB36 358 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 NCSTNQ92542 709 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 CCDC74BQ96LY2 380 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 PANX2Q96RD6 677 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 FCRL5Q96RD9 977 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 ASPSCR1Q9BZE9 553 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 GOLPH3Q9H4A6 298 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 BPIFA1Q9NP55 256 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 ARFGAP3Q9NP61 516 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 PRDM8Q9NQV8 689 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 SLC39A1Q9NY26 324 aa11.81□□□□□ -0.52
MED28-203ENST00000503945 AHCTF1Q8WYP5 2266 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 hCG_1818297A0A087WSY0 165 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 A8MU76 341 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 C9orf172C9J069 976 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 H7C0C1 242 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 AURKAO14965 403 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 ARHGAP6O43182 974 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 DUX1O43812 170 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 NDUFA10O95299 355 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 EML2O95834 649 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 FGF3P11487 239 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 ZNF7P17097 686 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 XRCC1P18887 633 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 NFKB1P19838 968 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 CTNNA2P26232 953 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 CD68P34810 354 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 ETV5P41161 510 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 ATP5OP48047 213 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 TMEM115Q12893 351 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 NFATC3Q12968 1075 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 MPP3Q13368 585 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 GTF2H3Q13889 308 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 SIRPB2Q5JXA9 342 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 SNAP47Q5SQN1 464 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 C11orf63Q6NUN7 778 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 ZNF761Q86XN6 746 aaPredicted RBP11.8□□□□□ -0.52
MED28-203ENST00000503945 ZNF567Q8N184 647 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 PLEKHG4BQ96PX9 1271 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 OSGEPL1Q9H4B0 414 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 HACD3Q9P035 362 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 PDP2Q9P2J9 529 aa11.8□□□□□ -0.52
MED28-203ENST00000503945 CPNE7Q9UBL6 633 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms