RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	OR14C36	Q8NHC7	312 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	FAM45A	Q8TCE6	357 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	GANC	Q8TET4	914 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	BTN2A2	Q8WVV5	523 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	ATXN7L3B	Q96GX2	97 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	OLFM1	Q99784	485 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	BOC	Q9BWV1	1114 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	SGK2	Q9HBY8	427 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	SNX15	Q9NRS6	342 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	CRLS1	Q9UJA2	301 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	SIT1	Q9Y3P8	196 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	PCDHB3	Q9Y5E6	796 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	PRSS21	Q9Y6M0	314 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TRPM6	Q9BX84	2022 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394		A0A1W2PQU0	124 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394		K7ESF4	209 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394		K7ESM1	405 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PFDN6	O15212	129 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PRPF4	O43172	522 aa	Known RBP eCLIP	12.03	□□□□□ -0.48	1e-12	■■■□□ 17.9
MATR3-231	ENST00000502394	RNGTT	O60942	597 aa	Known RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	APBB3	O95704	486 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	ESR1	P03372	595 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	DCN	P07585	359 aa	Known RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PKM	P14618	531 aa	Known RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	ZNF7	P17097	686 aa	Predicted RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PPARG	P37231	505 aa	Predicted RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	CDKN2D	P55273	166 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PPP2CB	P62714	309 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PPP2CA	P67775	309 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PDE1C	Q14123	709 aa	Predicted RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	MPP2	Q14168	576 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	KHDC1	Q4VXA5	237 aa	Known RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	ANO7	Q6IWH7	933 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	ADAMTSL4	Q6UY14	1074 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	MACC1	Q6ZN28	852 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	CLEC14A	Q86T13	490 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	SLC41A1	Q8IVJ1	513 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	CEP97	Q8IW35	865 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	KRT222	Q8N1A0	295 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	C4orf33	Q8N1A6	199 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	CAMKK1	Q8N5S9	505 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	OR2T34	Q8NGX1	318 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	GLYATL1	Q969I3	302 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	ALKBH8	Q96BT7	664 aa	Known RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	COX14	Q96I36	57 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	NDN	Q99608	321 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	KLF6	Q99612	283 aa	Predicted RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	BTBD1	Q9H0C5	482 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	CAB39L	Q9H9S4	337 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	WSB2	Q9NYS7	404 aa	Predicted RBP	12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	OGFR	Q9NZT2	677 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	SLC39A10	Q9ULF5	831 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	CRYL1	Q9Y2S2	319 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	VWA7	Q9Y334	891 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	PCDHB1	Q9Y5F3	818 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	COMMD10	Q9Y6G5	202 aa		12.03	□□□□□ -0.48
MATR3-231	ENST00000502394	LAT	O43561	262 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	DCX	O43602	365 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	SGTA	O43765	313 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	MPO	P05164	745 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	C2	P06681	752 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	PYGL	P06737	847 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC35E2B	P0CK96	405 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	KRT4	P19013	534 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	NR1D1	P20393	614 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	FMO4	P31512	558 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	TRIM23	P36406	574 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	NSG1	P42857	185 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC18A1	P54219	525 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	RAB10	P61026	200 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	PPP2R2A	P63151	447 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	USP10	Q14694	798 aa	Known RBP	12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM31	Q5JXX7	168 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	KDM7A	Q6ZMT4	941 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	FAM124A	Q86V42	546 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	12.02	□□□□□ -0.49	4e-9	■■■■□ 24
MATR3-231	ENST00000502394	GPATCH11	Q8N954	259 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	PLA2G15	Q8NCC3	412 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	DENND6B	Q8NEG7	585 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	DENND1A	Q8TEH3	1009 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	KCNJ9	Q92806	393 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	CENPT	Q96BT3	561 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	ELMO2	Q96JJ3	720 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	LENG8	Q96PV6	779 aa	Predicted RBP	12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	TTC1	Q99614	292 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	COPS8	Q99627	209 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	C1QTNF1	Q9BXJ1	281 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC17A9	Q9BYT1	436 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	POPDC3	Q9HBV1	291 aa		12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	MBNL1	Q9NR56	388 aa	Known RBP	12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	MBD1	Q9UIS9	605 aa	Predicted RBP	12.02	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3D	A0A087WVF3	549 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3I	A0A087WXS9	549 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3E	A0A087X179	549 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3K	A0A087X1G2	549 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	UBA6	A0AVT1	1052 aa	Predicted RBP	12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	LRRC72	A6NJI9	287 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3L	B9A6J9	549 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms