RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TSPAN3O60637 253 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 VPS26AO75436 327 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 CLDN11O75508 207 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 STC2O76061 302 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 ESRRBO95718 433 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 CD160O95971 181 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 CYBBP04839 570 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 PYGLP06737 847 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 GALTP07902 379 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 BMP2P12643 396 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 OXTRP30559 389 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 PRKCQQ04759 706 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 SMARCB1Q12824 385 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 RCAN2Q14206 197 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 RBBP7Q16576 425 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 C11orf91Q3C1V1 193 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 CXorf57Q6NSI4 855 aaKnown RBP9.77□□□□□ -0.84
CLIP1-204ENST00000501271 KLHDC10Q6PID8 442 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 EPHX4Q8IUS5 362 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 CPNE9Q8IYJ1 553 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 SLC43A3Q8NBI5 491 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 FBXO22Q8NEZ5 403 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 C2orf15Q8WU43 125 aaKnown RBP9.77□□□□□ -0.84
CLIP1-204ENST00000501271 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.77□□□□□ -0.84
CLIP1-204ENST00000501271 ZUFSPQ96AP4 578 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 LINGO1Q96FE5 620 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 PLEKHG4BQ96PX9 1271 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 CDK5RAP1Q96SZ6 601 aaKnown RBP9.77□□□□□ -0.84
CLIP1-204ENST00000501271 ACOX2Q99424 681 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 TMEM79Q9BSE2 394 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 C1orf50Q9BV19 199 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 VCX3AQ9NNX9 186 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 STARD7Q9NQZ5 370 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 AIG1Q9NVV5 245 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 DUS2Q9NX74 493 aaKnown RBP9.77□□□□□ -0.84
CLIP1-204ENST00000501271 EIF2B4Q9UI10 523 aaKnown RBP9.77□□□□□ -0.84
CLIP1-204ENST00000501271 PCDHA9Q9Y5H5 950 aa9.77□□□□□ -0.84
CLIP1-204ENST00000501271 CROCCQ5TZA2 2017 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 DHRS12A0PJE2 317 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 FAM149AA5PLN7 773 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 SAC3D1A6NKF1 404 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 AQP12BA6NM10 295 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 H7C4K7 107 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 E2F3O00716 465 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 ARPC2O15144 300 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 SNAP91O60641 907 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 VPS4BO75351 444 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 BAIAP3O94812 1187 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 IRF1P10914 325 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 TTPAP49638 278 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 UFM1P61960 85 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 ZRANB3Q5FWF4 1079 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 RABL3Q5HYI8 236 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 COQ5Q5HYK3 327 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 PAGE3Q5JUK9 113 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 TBCELQ5QJ74 424 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 RNF219Q5W0B1 726 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-204ENST00000501271 LCN8Q6JVE9 175 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 ZBTB49Q6ZSB9 765 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 AQP12AQ8IXF9 295 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 ZFP28Q8NHY6 868 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 DIS3LQ8TF46 1054 aaKnown RBP9.77□□□□□ -0.85
CLIP1-204ENST00000501271 TMEM125Q96AQ2 219 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 HGH1Q9BTY7 390 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 NUSAP1Q9BXS6 441 aaKnown RBP9.77□□□□□ -0.85
CLIP1-204ENST00000501271 GID8Q9NWU2 228 aa9.77□□□□□ -0.85
CLIP1-204ENST00000501271 TRMT6Q9UJA5 497 aaKnown RBP9.77□□□□□ -0.85
CLIP1-204ENST00000501271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 A0A1B0GVM2 712 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 A0A1W2PP18 115 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 ARHGAP10A1A4S6 786 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 IQCF5A8MTL0 148 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 SCAMP3O14828 347 aaKnown RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 TPST1O60507 370 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 TMCC1O94876 653 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 UROSP10746 265 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 MTHFD1P11586 935 aaKnown RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 SELPP16109 830 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 CES1P23141 567 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 FOXM1Q08050 763 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 ELAVL2Q12926 359 aaKnown RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 BNIP2Q12982 314 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 ZNF177Q13360 481 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 NFYCQ13952 458 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 RBBP5Q15291 538 aaKnown RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 NHSL2Q5HYW2 709 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 HECTD3Q5T447 861 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 PPP4R4Q6NUP7 873 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 TXNDC11Q6PKC3 985 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 SPATA19Q7Z5L4 167 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 TTC30BQ8N4P2 665 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 OR52B6Q8NGF0 335 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 DNAJB14Q8TBM8 379 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 GRIN3AQ8TCU5 1115 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 PLD4Q96BZ4 506 aa9.76□□□□□ -0.85
CLIP1-204ENST00000501271 CCDC97Q96F63 343 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 RPL10LQ96L21 214 aaKnown RBP9.76□□□□□ -0.85
CLIP1-204ENST00000501271 CDK15Q96Q40 435 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms