RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, human

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDCA7-208	ENST00000496441	EID2B	Q96D98	161 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	CENPK	Q9BS16	269 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	TRMO	Q9BU70	441 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	SMG9	Q9H0W8	520 aa	Known RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	PRSS51	A0A1B0GVH4	220 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441		A0A1B0GVM2	712 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	C7orf72	A4D263	438 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	HMGA1	P17096	107 aa	Known RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	LBP	P18428	481 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	CSK	P41240	450 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	TUFM	P49411	452 aa	Known RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	KPNA1	P52294	538 aa	Predicted RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	ACVR1	Q04771	509 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	NFYC	Q13952	458 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	CXorf57	Q6NSI4	855 aa	Known RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	APCDD1	Q8J025	514 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	PCYOX1L	Q8NBM8	494 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	CAPNS2	Q96L46	248 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	DEFB118	Q96PH6	123 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	ADGRE3	Q9BY15	652 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	CREBZF	Q9NS37	354 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	AFF4	Q9UHB7	1163 aa	Known RBP	11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	SLC30A1	Q9Y6M5	507 aa		11.44	□□□□□ -0.58
CDCA7-208	ENST00000496441	TRIM24	O15164	1050 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	TBC1D4	O60343	1298 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CD160	O95971	181 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	PYGL	P06737	847 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	OGN	P20774	298 aa	Known RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	HOXD10	P28358	340 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	INHBC	P55103	352 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	RHD	Q02161	417 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	PLOD1	Q02809	727 aa	Predicted RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	BFSP2	Q13515	415 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	SAMD4B	Q5PRF9	694 aa	Known RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	ARMC12	Q5T9G4	340 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	OR2T11	Q8NH01	316 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	MTFMT	Q96DP5	389 aa	Known RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	SEPHS2	Q99611	448 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CIPC	Q9C0C6	399 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	TFB2M	Q9H5Q4	396 aa	Known RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	PRM3	Q9NNZ6	103 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CNOT6	Q9ULM6	557 aa	Known RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	PKP3	Q9Y446	797 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	INPP4B	O15327	924 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CLIC3	O95833	236 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CLPTM1	O96005	669 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	OXTR	P30559	389 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	HTR6	P50406	440 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CYP4F8	P98187	520 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	ELAVL2	Q12926	359 aa	Known RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	RFTN1	Q14699	578 aa	Predicted RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	TYSND1	Q2T9J0	566 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	PAGE3	Q5JUK9	113 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	TBCEL	Q5QJ74	424 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	KANK2	Q63ZY3	851 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	PTRHD1	Q6GMV3	140 aa	Known RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	IL27RA	Q6UWB1	636 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	RALGPS2	Q86X27	583 aa	Predicted RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	GPR150	Q8NGU9	434 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CD200R1	Q8TD46	325 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	SKA2	Q8WVK7	121 aa	Predicted RBP	11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	MYLIP	Q8WY64	445 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	HIPK3	Q9H422	1215 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441		Q9H521	79 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CAAP1	Q9H8G2	361 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	CLEC4E	Q9ULY5	219 aa		11.43	□□□□□ -0.58
CDCA7-208	ENST00000496441	C1orf232	A0A0U1RR37	186 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	LCHN	A4D1U4	455 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	KRT87P	A6NCN2	255 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	SYNCRIP	O60506	623 aa	Known RBP	11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	CR2	P20023	1033 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	MYBPC1	Q00872	1141 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	ZBTB49	Q6ZSB9	765 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	FAM126B	Q8IXS8	530 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	SLC15A3	Q8IY34	581 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	METTL6	Q8TCB7	284 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	DLG3	Q92796	817 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	PLEKHG4B	Q96PX9	1271 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	EGFL8	Q99944	293 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	TMEM79	Q9BSE2	394 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	C17orf80	Q9BSJ5	609 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	SPATA16	Q9BXB7	569 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	DERL2	Q9GZP9	239 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	NSUN3	Q9H649	340 aa	Known RBP	11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	SUCO	Q9UBS9	1254 aa	Known RBP	11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	VPS51	Q9UID3	782 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	YIPF1	Q9Y548	306 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	ILVBL	A1L0T0	632 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	CLDN7	O95471	211 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	PRAMEF1	O95521	474 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	CYBB	P04839	570 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	CKM	P06732	381 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	HSPA7	P48741	367 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	TTPA	P49638	278 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	KCNK10	P57789	538 aa		11.42	□□□□□ -0.58
CDCA7-208	ENST00000496441	NOG	Q13253	232 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms