RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZNF8P17098 575 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-213ENST00000496347 CSF2RBP32927 897 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 OTUD4Q01804 1114 aaKnown RBP15.54■□□□□ 0.08
HDAC4-213ENST00000496347 KIF5AQ12840 1032 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 SQSTM1Q13501 440 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 TRA2AQ13595 282 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDAC4-213ENST00000496347 KIR2DS5Q14953 304 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 PHF19Q5T6S3 580 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 CHST15Q7LFX5 561 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-213ENST00000496347 TMPRSS9Q7Z410 1059 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 GLT6D1Q7Z4J2 308 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 TTC30BQ8N4P2 665 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 UBL4BQ8N7F7 174 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 OR4D9Q8NGE8 314 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 ALG3Q92685 438 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 NAF1Q96HR8 494 aaKnown RBP15.54■□□□□ 0.08
HDAC4-213ENST00000496347 NUDT22Q9BRQ3 303 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 TIMM29Q9BSF4 260 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 ZCCHC2Q9C0B9 1178 aaKnown RBP15.54■□□□□ 0.08
HDAC4-213ENST00000496347 B3GNT4Q9C0J1 378 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 RDH14Q9HBH5 336 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 KCNK4Q9NYG8 393 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 TBC1D29Q9UFV1 150 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 PISDQ9UG56 409 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 KCNK6Q9Y257 313 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 PRKAB1Q9Y478 270 aa15.54■□□□□ 0.08
HDAC4-213ENST00000496347 TEX51A0A1B0GUA7 166 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 OR5K4A6NMS3 321 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 AURKAO14965 403 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 PPM1DO15297 605 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 NVLO15381 856 aaKnown RBP15.53■□□□□ 0.08
HDAC4-213ENST00000496347 KLK10O43240 276 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 THRAP10827 490 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 RBL1P28749 1068 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 CD1CP29017 333 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 SPAM1P38567 509 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 CHRNA4P43681 627 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 EPHA4P54764 986 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 GEMP55040 296 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 EIF3EP60228 445 aaKnown RBP15.53■□□□□ 0.08
HDAC4-213ENST00000496347 HHEXQ03014 270 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-213ENST00000496347 CRTC3Q6UUV7 619 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 GPR155Q7Z3F1 870 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 PEX26Q7Z412 305 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 ADGRG6Q86SQ4 1221 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 OR10G6Q8NH81 332 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 SH3KBP1Q96B97 665 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 SLC38A3Q99624 504 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 ZMYND15Q9H091 742 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 SEMA6CQ9H3T2 930 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 EPB41L1Q9H4G0 881 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 SMOXQ9NWM0 555 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 SSUH2Q9Y2M2 353 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 PKP3Q9Y446 797 aa15.53■□□□□ 0.08
HDAC4-213ENST00000496347 IGHV5-10-1A0A0J9YXX1 117 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 F5H423 210 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-213ENST00000496347 KMOO15229 486 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 EML2O95834 649 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 RBP3P10745 1247 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 HGFP14210 728 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 CD82P27701 267 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 SLC5A2P31639 672 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 CXADRP78310 365 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 CLN3Q13286 438 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 INSCQ1MX18 579 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 IYDQ6PHW0 289 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 SLC9B2Q86UD5 537 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 LRRTM4Q86VH4 590 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 JAMLQ86YT9 394 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 SLC25A41Q8N5S1 370 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 CCDC112Q8NEF3 446 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 BLOC1S5Q8TDH9 187 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 SNRNP27Q8WVK2 155 aaKnown RBP15.52■□□□□ 0.08
HDAC4-213ENST00000496347 CCDC74BQ96LY2 380 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 SPATA13Q96N96 652 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 GORASP1Q9BQQ3 440 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 IL26Q9NPH9 171 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 IL17CQ9P0M4 197 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 AMFRQ9UKV5 643 aa15.52■□□□□ 0.08
HDAC4-213ENST00000496347 AAR2Q9Y312 384 aaKnown RBP15.52■□□□□ 0.08
HDAC4-213ENST00000496347 BAHCC1Q9P281 2608 aa15.52■□□□□ 0.07
HDAC4-213ENST00000496347 GOLGA6L9A6NEM1 432 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 LILRA5A6NI73 299 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 KCNN4O15554 427 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 PTMAP06454 111 aaKnown RBP15.51■□□□□ 0.07
HDAC4-213ENST00000496347 VCLP18206 1134 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 PSMB4P28070 264 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 LIMK2P53671 638 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 ITGA9Q13797 1035 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 GTF2H3Q13889 308 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 PRPSAP1Q14558 356 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 C16orf72Q14CZ0 275 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 ATP13A5Q4VNC0 1218 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 SOWAHCQ53LP3 525 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-213ENST00000496347 WDR74Q6RFH5 385 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-213ENST00000496347 TTC13Q8NBP0 860 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 DDHD1Q8NEL9 900 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 BRSK1Q8TDC3 778 aa15.51■□□□□ 0.07
HDAC4-213ENST00000496347 LRRC45Q96CN5 670 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms