RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 MSH2P43246 934 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 STAT2P52630 851 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 UBXN2AP68543 259 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 KRT83P78385 493 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 TMF1P82094 1093 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 ZBED6P86452 979 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 EGR4Q05215 589 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 SREBF2Q12772 1141 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 TRAF3Q13114 568 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 KCNC3Q14003 757 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 NEDD9Q14511 834 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 KYNUQ16719 465 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 MYLK3Q32MK0 819 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 KRTAP24-1Q3LI83 254 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 DCAF6Q58WW2 860 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 C1QTNF12Q5T7M4 302 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 GGNBP1Q5YKI7 109 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 SIGIRRQ6IA17 410 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 LCN10Q6JVE6 187 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 ADIPOR2Q86V24 386 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 RASGEF1CQ8N431 466 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 MINDY1Q8N5J2 469 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 ACVR1CQ8NER5 493 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 ELP5Q8TE02 316 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 APBB2Q92870 758 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 ZNF622Q969S3 477 aaKnown RBP eCLIP3.7□□□□□ -1.82
CLK1-214ENST00000496205 PGAP3Q96FM1 320 aaPredicted RBP3.7□□□□□ -1.82
CLK1-214ENST00000496205 GFI1Q99684 422 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 NCAPGQ9BPX3 1015 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 SIL1Q9H173 461 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 EPB41L5Q9HCM4 733 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 ZCCHC17Q9NP64 241 aaKnown RBP3.7□□□□□ -1.82
CLK1-214ENST00000496205 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
CLK1-214ENST00000496205 ARHGEF38Q9NXL2 777 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 MARCH4Q9P2E8 410 aaPredicted RBP3.7□□□□□ -1.82
CLK1-214ENST00000496205 OR14J1Q9UGF5 321 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 FBXW11Q9UKB1 542 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 ACSL5Q9ULC5 683 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 TRPV2Q9Y5S1 764 aa3.7□□□□□ -1.82
CLK1-214ENST00000496205 hCG_1809904A0A1W2PP81 198 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 A0A1W2PPE2 198 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 RPS10-NUDT3A0A1W2PQS6 291 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 A0A1W2PR64 198 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 CPED1A4D0V7 1026 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 URADA6NGE7 173 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 TSPY2A6NKD2 308 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 SOCS6O14544 535 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 SMAD9O15198 467 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 TBX10O75333 385 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 DAB1O75553 588 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 CREG1O75629 220 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 MTA2O94776 668 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 BCL10O95999 233 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 TSPY3P0CV98 308 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 TSPY8P0CW00 308 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 UBA1P22314 1058 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 GPTP24298 496 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 SSTR2P30874 369 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 HOXC9P31274 260 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 RFX2P48378 723 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 NUDT6P53370 316 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 PPP2R2BQ00005 443 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 TSPY1Q01534 308 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 TFAP4Q01664 338 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 ROR1Q01973 937 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 GRSF1Q12849 480 aaKnown RBP eCLIP3.69□□□□□ -1.82
CLK1-214ENST00000496205 AIMP1Q12904 312 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 BAATQ14032 418 aaPredicted RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 IL11RAQ14626 422 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 KRT71Q3SY84 523 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 KRT79Q5XKE5 535 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 METTL2BQ6P1Q9 378 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 DUS1LQ6P1R4 473 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 TEX38Q6PEX7 206 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 SLC36A4Q6YBV0 504 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 TAOK1Q7L7X3 1001 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 CEP97Q8IW35 865 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 CHERPQ8IWX8 916 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 PCDH20Q8N6Y1 951 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 PRR26Q8N8Z3 221 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 OR1J2Q8NGS2 313 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 HM13Q8TCT9 377 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 PTPMT1Q8WUK0 201 aaPredicted RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 OTULINQ96BN8 352 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 ORAI1Q96D31 301 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 METTL2AQ96IZ6 378 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 HARBI1Q96MB7 349 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 ZMAT2Q96NC0 199 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 NAP1L5Q96NT1 182 aaPredicted RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 DGAT2Q96PD7 388 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 SMC6Q96SB8 1091 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 CDRT15Q96T59 188 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 CSF3RQ99062 836 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 KIFC3Q9BVG8 833 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 SF3B5Q9BWJ5 86 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 OR10A4Q9H209 315 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 RETREG1Q9H6L5 497 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 DNAJC18Q9H819 358 aa3.69□□□□□ -1.82
CLK1-214ENST00000496205 CPSF2Q9P2I0 782 aaKnown RBP3.69□□□□□ -1.82
CLK1-214ENST00000496205 CRNNQ9UBG3 495 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms