RNA–Protein interactions for RNA: ENST00000495000.1

C1orf61-222, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-222	ENST00000495000	UGT1A6	P19224	532 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	LPO	P22079	712 aa	Predicted RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	UGT1A1	P22309	533 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	UGT1A4	P22310	534 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	RBMS1	P29558	406 aa	Known RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	UGT1A3	P35503	534 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	UGT1A5	P35504	534 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	PPM1F	P49593	454 aa	Predicted RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	TMEM115	Q12893	351 aa	Predicted RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	ITGA9	Q13797	1035 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	TAF1A	Q15573	450 aa	Predicted RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	INSC	Q1MX18	579 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	P3H1	Q32P28	736 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	TBC1D25	Q3MII6	688 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	KHDC1	Q4VXA5	237 aa	Known RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	C19orf48	Q6RUI8	117 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	LRRTM4	Q86VH4	590 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	TRAPPC5	Q8IUR0	188 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	OR4K2	Q8NGD2	314 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	WDR36	Q8NI36	951 aa	Known RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	SLC37A2	Q8TED4	501 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	C1orf54	Q8WWF1	131 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	FGF11	Q92914	225 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	ZNF578	Q96N58	590 aa	Predicted RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	TTC25	Q96NG3	672 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	ZMYND15	Q9H091	742 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	STN1	Q9H668	368 aa	Known RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	UGT1A7	Q9HAW7	530 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	UGT1A10	Q9HAW8	530 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	UGT1A8	Q9HAW9	530 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	KLC4	Q9NSK0	619 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	TBC1D29	Q9UFV1	150 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	DNAJC16	Q9Y2G8	782 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	PPP2R2C	Q9Y2T4	447 aa		10.69	□□□□□ -0.7
C1orf61-222	ENST00000495000	PMS2P1	A4D2B8	440 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	GOLGA6L3	A6NEY3	463 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	AGRP	O00253	132 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	CHUK	O15111	745 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	RRP8	O43159	456 aa	Known RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	LIAS	O43766	372 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	DXO	O77932	396 aa	Known RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	PRAMEF1	O95521	474 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	CPNE6	O95741	557 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	F3	P13726	295 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	ZNF7	P17097	686 aa	Predicted RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	CCKBR	P32239	447 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	EIF2S3	P41091	472 aa	Known RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	GPR3	P46089	330 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	FASLG	P48023	281 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	TMPRSS15	P98073	1019 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	HHEX	Q03014	270 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	SNX1	Q13596	522 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	NR1D2	Q14995	579 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	LDLRAP1	Q5SW96	308 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	PHF19	Q5T6S3	580 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	NKAIN2	Q5VXU1	208 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	KCTD11	Q693B1	232 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	IYD	Q6PHW0	289 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	LRRC69	Q6ZNQ3	347 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	USP53	Q70EK8	1073 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	RAB11FIP2	Q7L804	512 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	PIM3	Q86V86	326 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	ZNF761	Q86XN6	746 aa	Predicted RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	KLHDC8B	Q8IXV7	354 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	SFRP1	Q8N474	314 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	FBXO39	Q8N4B4	442 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	TRIM58	Q8NG06	486 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	SNIP1	Q8TAD8	396 aa	Known RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	ZNF398	Q8TD17	642 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	DTX3L	Q8TDB6	740 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	BRSK1	Q8TDC3	778 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	LIN37	Q96GY3	246 aa	Predicted RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	SLC38A3	Q99624	504 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	TIMM29	Q9BSF4	260 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	LRRC40	Q9H9A6	602 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	RDH14	Q9HBH5	336 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	PRDM8	Q9NQV8	689 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	THSD1	Q9NS62	852 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	KCNK4	Q9NYG8	393 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	FKBPL	Q9UIM3	349 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	ZNF148	Q9UQR1	794 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	KCTD3	Q9Y597	815 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	PCDHGA8	Q9Y5G5	932 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	CEP295	Q9C0D2	2601 aa		10.68	□□□□□ -0.7
C1orf61-222	ENST00000495000	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	USP24	Q9UPU5	2620 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000		A0A087WV48	116 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000		A6NCN8	305 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	OR5K4	A6NMS3	321 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	PDZK1P1	A8MUH7	402 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	GAPDHS	O14556	408 aa	Predicted RBP	10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	PLD2	O14939	933 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	PSMD3	O43242	534 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	TNFSF15	O95150	251 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	IFNB1	P01574	187 aa		10.67	□□□□□ -0.7
C1orf61-222	ENST00000495000	HGF	P14210	728 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms