RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 GPR26Q8NDV2 337 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.94■■□□□ 1.26
COL27A1-208ENST00000494780 PLEKHG4BQ96PX9 1271 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 TBC1D10AQ9BXI6 508 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 TRIT1Q9H3H1 467 aaKnown RBP22.94■■□□□ 1.26
COL27A1-208ENST00000494780 KLC4Q9NSK0 619 aa22.94■■□□□ 1.26
COL27A1-208ENST00000494780 TMEM184BQ9Y519 407 aaPredicted RBP22.94■■□□□ 1.26
COL27A1-208ENST00000494780 MN1Q10571 1320 aaPredicted RBP22.93■■□□□ 1.26
COL27A1-208ENST00000494780 CHUKO15111 745 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 ANKRD34CP0C6C1 535 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 TMEM253P0C7T8 217 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 XRCC1P18887 633 aaPredicted RBP22.93■■□□□ 1.26
COL27A1-208ENST00000494780 ABHD18Q0P651 414 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 AP1B1Q10567 949 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 KCNAB2Q13303 367 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 MESDQ14696 234 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 PDK1Q15118 436 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 SLC14A2Q15849 920 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 ALS2CLQ60I27 953 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 TMC3Q7Z5M5 1100 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 ADGRG6Q86SQ4 1221 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 NT5DC3Q86UY8 548 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 GLYATL1Q969I3 302 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 COL26A1Q96A83 441 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 APMAPQ9HDC9 416 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 ARFGAP3Q9NP61 516 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 KLHL3Q9UH77 587 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 SHOC2Q9UQ13 582 aa22.93■■□□□ 1.26
COL27A1-208ENST00000494780 LOC101059948A0A1B0GTJ6 334 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 APOL1O14791 398 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 ARHGAP6O43182 974 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 STK17BO94768 372 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 MTA2O94776 668 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 CDK18Q07002 472 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 ASTE1Q2TB18 679 aaPredicted RBP22.92■■□□□ 1.26
COL27A1-208ENST00000494780 ZNF648Q5T619 568 aaPredicted RBP22.92■■□□□ 1.26
COL27A1-208ENST00000494780 TIPARPQ7Z3E1 657 aaKnown RBP22.92■■□□□ 1.26
COL27A1-208ENST00000494780 KDELC2Q7Z4H8 507 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 TADA1Q96BN2 335 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 MAK16Q9BXY0 300 aaKnown RBP22.92■■□□□ 1.26
COL27A1-208ENST00000494780 BRD8Q9H0E9 1235 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 SLC25A51Q9H1U9 297 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 OSGEPL1Q9H4B0 414 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 ZNF711Q9Y462 761 aa22.92■■□□□ 1.26
COL27A1-208ENST00000494780 SSU72P8A0A1W2PR75 194 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 C3orf70A6NLC5 250 aaPredicted RBP22.91■■□□□ 1.26
COL27A1-208ENST00000494780 PPP1R12AO14974 1030 aaPredicted RBP22.91■■□□□ 1.26
COL27A1-208ENST00000494780 POLR1CO15160 346 aaPredicted RBP22.91■■□□□ 1.26
COL27A1-208ENST00000494780 KMOO15229 486 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 C9P02748 559 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 TPM3P06753 285 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 PIRTP0C851 137 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 ZFXP17010 805 aaPredicted RBP22.91■■□□□ 1.26
COL27A1-208ENST00000494780 INSCQ1MX18 579 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 LRRTM4Q86VH4 590 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 AGAP3Q96P47 875 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 OLFM3Q96PB7 478 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 SRPK1Q96SB4 655 aaKnown RBP22.91■■□□□ 1.26
COL27A1-208ENST00000494780 CEP41Q9BYV8 373 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 GPR63Q9BZJ6 419 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 DEF6Q9H4E7 631 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 SIDT1Q9NXL6 827 aaKnown RBP22.91■■□□□ 1.26
COL27A1-208ENST00000494780 SCHIP1Q9P0W5 487 aaPredicted RBP22.91■■□□□ 1.26
COL27A1-208ENST00000494780 SLC23A2Q9UGH3 650 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 BOD1L1Q8NFC6 3051 aa22.91■■□□□ 1.26
COL27A1-208ENST00000494780 NKX2-8O15522 239 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 VEGFDO43915 354 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 DLGAP3O95886 979 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 VIPP01282 170 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 ZNF7P17097 686 aaPredicted RBP22.9■■□□□ 1.26
COL27A1-208ENST00000494780 ARHGAP25P42331 645 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 NOP2P46087 812 aaKnown RBP22.9■■□□□ 1.26
COL27A1-208ENST00000494780 MAP7Q14244 749 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 CRTC3Q6UUV7 619 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 TMEM26Q6ZUK4 368 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 TRIM48Q8IWZ4 208 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 OR8K1Q8NGG5 319 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 SLC35G2Q8TBE7 412 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 C9orf72Q96LT7 481 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 DNAJC7Q99615 494 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 TIMM29Q9BSF4 260 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 XPO4Q9C0E2 1151 aaKnown RBP22.9■■□□□ 1.26
COL27A1-208ENST00000494780 OGFRQ9NZT2 677 aa22.9■■□□□ 1.26
COL27A1-208ENST00000494780 TOX3O15405 576 aaPredicted RBP22.89■■□□□ 1.25
COL27A1-208ENST00000494780 SLC4A1P02730 911 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 SLC19A1P41440 591 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 GFERP55789 205 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 MC1RQ01726 317 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 CDC20Q12834 499 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 PCSK7Q16549 785 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 CCDC70Q6NSX1 233 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 UNC5BQ8IZJ1 945 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 ESX1Q8N693 406 aa22.89■■□□□ 1.25
COL27A1-208ENST00000494780 ZNF624Q9P2J8 865 aaPredicted RBP22.89■■□□□ 1.25
COL27A1-208ENST00000494780 PRR19A6NJB7 356 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 AKR1B10O60218 316 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 UBXN7O94888 489 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 NDST3O95803 873 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 BPIP17213 487 aa22.88■■□□□ 1.25
COL27A1-208ENST00000494780 TRIM14Q14142 442 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms