RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ADH1CP00326 375 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 CTSLP07711 333 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 NCF2P19878 526 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 FSHRP23945 695 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 IL2P60568 153 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 KDSRQ06136 332 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 GPR33Q49SQ1 333 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 FAM219BQ5XKK7 198 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 TEX9Q8N6V9 391 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 ST13P5Q8NFI4 369 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 LKAAEAR1Q8TD35 194 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 LINGO1Q96FE5 620 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 CIPCQ9C0C6 399 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 EML4Q9HC35 981 aaKnown RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 RNF112Q9ULX5 631 aa16.38■□□□□ 0.21
ATG4B-225ENST00000494465 MUC22E2RYF6 1773 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-225ENST00000494465 DOCK8Q8NF50 2099 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 BTN3A1O00481 513 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 GYG2O15488 501 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 LEFTY1O75610 366 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 TSPAN8P19075 237 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 RECQLP46063 649 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 RARS2Q5T160 578 aaKnown RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 BRAT1Q6PJG6 821 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 NXPE1Q8N323 547 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 CLDN19Q8N6F1 224 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 FAM13CQ8NE31 585 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 CLPBQ9H078 707 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 EBF3Q9H4W6 596 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 ZNF385DQ9H6B1 395 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 KIAA1549LQ6ZVL6 1849 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 CCDC189A1A4V9 331 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 TSPAN11A1L157 253 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 B2RBV5 119 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 SDHDO14521 159 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 DCXO43602 365 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 KLK8O60259 260 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 ATP6V1G2O95670 118 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 SRPRAP08240 638 aaKnown RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 FCARP24071 287 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 PPARGP37231 505 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 ARSIQ5FYB1 569 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 LYPLAL1Q5VWZ2 237 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 UGT3A1Q6NUS8 523 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 RBM15BQ8NDT2 890 aaKnown RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 PDLIM5Q96HC4 596 aaKnown RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 CCDC28BQ9BUN5 200 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 APOL5Q9BWW9 433 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 SARS2Q9NP81 518 aaKnown RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 CRLS1Q9UJA2 301 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 CDYLQ9Y232 598 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 MYO9BQ13459 2157 aa16.37■□□□□ 0.21
ATG4B-225ENST00000494465 TCF20Q9UGU0 1960 aaKnown RBP16.37■□□□□ 0.21
ATG4B-225ENST00000494465 SUPT3HB4E1H0 165 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 PPP6CO00743 305 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 SUPT3HO75486 399 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 SLC6A11P48066 632 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 SPINT3P49223 89 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 HK3P52790 923 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 CDH13P55290 713 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 POLR2LP62875 67 aaKnown RBP16.36■□□□□ 0.21
ATG4B-225ENST00000494465 BTKQ06187 659 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 PPP2R2DQ66LE6 453 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 WFIKKN2Q8TEU8 576 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 NXPE3Q969Y0 559 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 FAM83CQ9BQN1 747 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 GNPTGQ9UJJ9 305 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 PLXNA2O75051 1894 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 HEPACAM2A8MVW5 462 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 PRRT4C9JH25 899 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 SPECC1L-ADORA2AF8WAN1 911 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 ASLP04424 464 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 GFAPP14136 432 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 NNMTP40261 264 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 SH3BP2P78314 561 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 ATP13A5Q4VNC0 1218 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 PTRHD1Q6GMV3 140 aaKnown RBP16.36■□□□□ 0.21
ATG4B-225ENST00000494465 CYHR1Q6ZMK1 362 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 MACC1Q6ZN28 852 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 GET4Q7L5D6 327 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-225ENST00000494465 FBXO39Q8N4B4 442 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 POU5F2Q8N7G0 328 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 ZNF366Q8N895 744 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 PBXIP1Q96AQ6 731 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 NSUN5Q96P11 429 aaKnown RBP16.36■□□□□ 0.21
ATG4B-225ENST00000494465 PLEKHG4BQ96PX9 1271 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 TTC1Q99614 292 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 TRPV4Q9HBA0 871 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 TMPRSS11EQ9UL52 423 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 SZT2Q5T011 3432 aa16.36■□□□□ 0.21
ATG4B-225ENST00000494465 GOLGA8CPA6NN73 597 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 RFXAPO00287 272 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 CDK14O94921 469 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 CD1EP15812 388 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 TIMP2P16035 220 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 NAA25Q14CX7 972 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 TMEM198Q66K66 360 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 ACAD11Q709F0 780 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 GPR149Q86SP6 731 aa16.35■□□□□ 0.21
ATG4B-225ENST00000494465 TMPRSS6Q8IU80 811 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms