RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ARRDC3Q96B67 414 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 PTERQ96BW5 349 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 ULK4Q96C45 1275 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 CNDP1Q96KN2 507 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 RMDN2Q96LZ7 410 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 TTC1Q99614 292 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SLC30A3Q99726 388 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 GABRG3Q99928 467 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 KXD1Q9BQD3 176 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 TRMOQ9BU70 441 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 APOL5Q9BWW9 433 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 TRIM55Q9BYV6 548 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 CIPCQ9C0C6 399 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 FAM107BQ9H098 131 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 RSPH9Q9H1X1 276 aaPredicted RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 MTG2Q9H4K7 406 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 FAM96AQ9H5X1 160 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 EPHX3Q9H6B9 360 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 ASB8Q9H765 288 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 ZNF395Q9H8N7 513 aaPredicted RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 PCDH12Q9NPG4 1184 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 PKD2L2Q9NZM6 624 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 XPR1Q9UBH6 696 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SLC12A4Q9UP95 1085 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 MTF2Q9Y483 593 aaPredicted RBP6.73□□□□□ -1.33
MSH5-217ENST00000494458 ST14Q9Y5Y6 855 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 PRSS21Q9Y6M0 314 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 NUMBLQ9Y6R0 609 aa6.73□□□□□ -1.33
MSH5-217ENST00000494458 SPTBN5Q9NRC6 3674 aaKnown RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 TBC1D3BA6NDS4 549 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 GRXCR2A6NFK2 248 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 A8MT66 165 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 F8W8V4 182 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 STX16-NPEPL1H3BU86 382 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 MATN2O00339 956 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 STX16O14662 325 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ZBTB14O43829 449 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 KERAO60938 352 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 VPS26AO75436 327 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 AP2A2O94973 939 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 SOD1P00441 154 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 FGF4P08620 206 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 CBSLP0DN79 551 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 T-ENOLP0DO92 83 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 TROVE2P10155 538 aaKnown RBP eCLIP6.72□□□□□ -1.33
MSH5-217ENST00000494458 UGT1A6P19224 532 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 TFEBP19484 476 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 UGT1A1P22309 533 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 UGT1A4P22310 534 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 TEAD1P28347 426 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 UGT1A3P35503 534 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 UGT1A5P35504 534 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 CBSP35520 551 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 NAGLUP54802 743 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ELP6Q0PNE2 266 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ASPHQ12797 758 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 IFT88Q13099 833 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 RCN2Q14257 317 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 GRM2Q14416 872 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 OR4D1Q15615 310 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ZRANB3Q5FWF4 1079 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 TMEM196Q5HYL7 178 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ZNF678Q5SXM1 525 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 METTL21CQ5VZV1 264 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 METTL2BQ6P1Q9 378 aaKnown RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 KLC3Q6P597 504 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 EPGNQ6UW88 154 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 FAM151BQ6UXP7 276 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ZCCHC23Q6ZST2 131 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 NUDT18Q6ZVK8 323 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 PARS2Q7L3T8 475 aaKnown RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 MAVSQ7Z434 540 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 TTC7BQ86TV6 843 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 PIM3Q86V86 326 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 RALGPS2Q86X27 583 aaPredicted RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 CRLF3Q8IUI8 442 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 YAF2Q8IY57 180 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 RYBPQ8N488 228 aaPredicted RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 STAG3L4Q8TBR4 150 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 PIP4K2CQ8TBX8 421 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 BTN2A2Q8WVV5 523 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.72□□□□□ -1.33
MSH5-217ENST00000494458 FUBP1Q96AE4 644 aaKnown RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 SKA1Q96BD8 255 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 DTD2Q96FN9 168 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 MAELQ96JY0 434 aaKnown RBP6.72□□□□□ -1.33
MSH5-217ENST00000494458 TSNARE1Q96NA8 513 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ACOX2Q99424 681 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 GPR21Q99679 349 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ZSCAN5AQ9BUG6 496 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 BOCQ9BWV1 1114 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 ABCG8Q9H221 673 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 FAM83DQ9H4H8 585 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 GSTO2Q9H4Y5 243 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 FBRSQ9HAH7 460 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 RDH14Q9HBH5 336 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 DNAJC28Q9NX36 388 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 KCTD5Q9NXV2 234 aa6.72□□□□□ -1.33
MSH5-217ENST00000494458 CLDND1Q9NY35 253 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms