RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 PMS2CLQ68D20 193 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 GDPD4Q6W3E5 623 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 DSG4Q86SJ6 1040 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 SMIM29Q86T20 159 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 SLC44A1Q8WWI5 657 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 NEURL2Q9BR09 285 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 TCF7L2Q9NQB0 619 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 SEPT11Q9NVA2 429 aaKnown RBP6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 SETD4Q9NVD3 440 aa6.88□□□□□ -1.31
HMGB3P14-201ENST00000494195 OGG1O15527 345 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 XPNPEP2O43895 674 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 PTP4A3O75365 173 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 FAM106CPP0CH98 169 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 ANXA7P20073 488 aaKnown RBP6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 FMO5P49326 533 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 C4orf50Q6ZRC1 276 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 TEX11Q8IYF3 940 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 LMNTD1Q8N9Z9 388 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 HJURPQ8NCD3 748 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 UTP15Q8TED0 518 aaKnown RBP6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 OR2A14Q96R47 310 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 LRRC1Q9BTT6 524 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 KRTAP2-2Q9BYT5 123 aa6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 TCF20Q9UGU0 1960 aaKnown RBP6.87□□□□□ -1.31
HMGB3P14-201ENST00000494195 A0A1W2PP11 408 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 SMAD9O15198 467 aaKnown RBP6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 GPC4O75487 556 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 OR2C1O95371 312 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 AMPHP49418 695 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 COG7P83436 770 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 PLIN5Q00G26 463 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 CFAP77Q6ZQR2 320 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 ATG9AQ7Z3C6 839 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 METTL27Q8N6F8 245 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 OR13A1Q8NGR1 328 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 PGAM5Q96HS1 289 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 NODALQ96S42 347 aa6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 TMEM184BQ9Y519 407 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P14-201ENST00000494195 ZCWPW2A0A1B0GU75 182 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 HS6ST1O60243 411 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 ZBED4O75132 1171 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 CRYAAP02489 173 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 SRPRAP08240 638 aaKnown RBP6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 HOXA13P31271 388 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 CAMPP49913 170 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 GPR143P51810 404 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 TERF1P54274 439 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 CDH8P55286 799 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 STXBP5Q5T5C0 1151 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 OR7E24Q6IFN5 339 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 CHST9Q7L1S5 443 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 CCDC190Q86UF4 302 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 PM20D2Q8IYS1 436 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 RASGEF1CQ8N431 466 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 EMC1Q8N766 993 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 SLC38A9Q8NBW4 561 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 TMEM255BQ8WV15 326 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 EPYCQ99645 322 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 SEMA3CQ99985 751 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 CHCHD6Q9BRQ6 235 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 PLK3Q9H4B4 646 aa6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 LAS1LQ9Y4W2 734 aaKnown RBP6.85□□□□□ -1.31
HMGB3P14-201ENST00000494195 OR5K3A6NET4 321 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 CAPN9O14815 690 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 LMX1BO60663 402 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 ATP1A1P05023 1023 aaKnown RBP6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 UMODP07911 640 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 RUNX1T1Q06455 604 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 SIM2Q14190 667 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 RAD9BQ6WBX8 426 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 Q6ZTC4 211 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 KCTD8Q6ZWB6 473 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 PLEKHM3Q6ZWE6 761 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 TTC39CQ8N584 583 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 MOAP1Q96BY2 351 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 NUDCD1Q96RS6 583 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 SMC6Q96SB8 1091 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 FTOQ9C0B1 505 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 MMP28Q9H239 520 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 LRMDAQ9H2I8 198 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 OGFRQ9NZT2 677 aa6.84□□□□□ -1.31
HMGB3P14-201ENST00000494195 CTAGE9A4FU28 777 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 FAM172BPA6NC97 362 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 EIF3DO15371 548 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 CTAGE8P0CG41 777 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 GABRB1P18505 474 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 MSH2P43246 934 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 IKQ13123 557 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 RARS2Q5T160 578 aaKnown RBP6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 STPG1Q5TH74 334 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 KIAA0930Q6ICG6 404 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 FAM171BQ6P995 826 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 NFE4Q86UQ8 179 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 CTAGE4Q8IX94 777 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 ADGRF2Q8IZF7 708 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 TMTC2Q8N394 836 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 DMBX1Q8NFW5 382 aa6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 TREX2Q9BQ50 279 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 POLR3CQ9BUI4 534 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P14-201ENST00000494195 C1QTNF1Q9BXJ1 281 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms