RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 HECTD2Q5U5R9 776 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 SPRED2Q7Z698 418 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 CCDC117Q8IWD4 279 aaPredicted RBP6.99□□□□□ -1.29
HERC4-211ENST00000492996 KLHDC8BQ8IXV7 354 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 RMDN1Q96DB5 314 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 TMEM169Q96HH4 297 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 OSBPL10Q9BXB5 764 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 FAM96AQ9H5X1 160 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 STN1Q9H668 368 aaKnown RBP6.99□□□□□ -1.29
HERC4-211ENST00000492996 CLDND1Q9NY35 253 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 PPM1HQ9ULR3 514 aa6.99□□□□□ -1.29
HERC4-211ENST00000492996 RPL26L1Q9UNX3 145 aaKnown RBP6.99□□□□□ -1.29
HERC4-211ENST00000492996 UBA6A0AVT1 1052 aaPredicted RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 KRBA1A5PL33 1030 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 TARM1B6A8C7 271 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 GREM1O60565 184 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CSPG5O95196 566 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CHRNB1P11230 501 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 NAT2P11245 290 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ITGAXP20702 1163 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 VHLP40337 213 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 RGRP47804 291 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 KCNC1P48547 511 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 MTTPP55157 894 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ADARP55265 1226 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 CDKN2DP55273 166 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 MRPS21P82921 87 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 POU4F1Q01851 419 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 NRG1Q02297 640 aaPredicted RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 TBL3Q12788 808 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 SLC14A1Q13336 389 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 PUM1Q14671 1186 aaKnown RBP eCLIP6.98□□□□□ -1.29
HERC4-211ENST00000492996 TAF12Q16514 161 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 FAM83EQ2M2I3 478 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 TRMT5Q32P41 509 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 CILP2Q8IUL8 1156 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 PDZD8Q8NEN9 1154 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CEP70Q8NHQ1 597 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 PTCD2Q8WV60 388 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 ANKRD27Q96NW4 1050 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 POLR1EQ9GZS1 481 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 VPS45Q9NRW7 570 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 OLA1Q9NTK5 396 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.98□□□□□ -1.29
HERC4-211ENST00000492996 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 VWA7Q9Y334 891 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CHD9Q3L8U1 2897 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 IGLV3-10A0A075B6K4 115 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ATP6AP2A0A1C7CYW4 349 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CCDC162PA2VCL2 907 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CBX4O00257 560 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 LDB2O43679 373 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ATP6AP2O75787 350 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ATXN1LP0C7T5 689 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 PIK3R1P27986 724 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ATP5C1P36542 298 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 TUFMP49411 452 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 CDH13P55290 713 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ACTR3P61158 418 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 TFF2Q03403 129 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 IL10RBQ08334 325 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CNPY1Q3B7I2 92 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 SMUG1Q53HV7 270 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 SPOUT1Q5T280 376 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 LINGO4Q6UY18 593 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ACAD11Q709F0 780 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 NET1Q7Z628 596 aaPredicted RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 NPAS3Q8IXF0 933 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CPXM2Q8N436 756 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 PPFIBP2Q8ND30 876 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CALML6Q8TD86 181 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CHFRQ96EP1 664 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 LMLNQ96KR4 655 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CDK5RAP1Q96SZ6 601 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 GABRG3Q99928 467 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 MRPL57Q9BQC6 102 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 KCNK12Q9HB15 430 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 ARNT2Q9HBZ2 717 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 TNFRSF12AQ9NP84 129 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 IGSF5Q9NSI5 407 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 NCKIPSDQ9NZQ3 722 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 STX18Q9P2W9 335 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 DNMT3BQ9UBC3 853 aaKnown RBP6.98□□□□□ -1.29
HERC4-211ENST00000492996 ZNF212Q9UDV6 495 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 CDYLQ9Y232 598 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 SLC27A6Q9Y2P4 619 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 LRRC42Q9Y546 428 aa6.98□□□□□ -1.29
HERC4-211ENST00000492996 KIAA0100Q14667 2235 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 SUPT7LO94864 414 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 S1PR4O95977 384 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 GOT2P00505 430 aaKnown RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 SERPINF2P08697 491 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 MYL4P12829 197 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 ENO3P13929 434 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 ANPEPP15144 967 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 ATP5F1P24539 256 aaPredicted RBP6.97□□□□□ -1.29
HERC4-211ENST00000492996 CSRP3P50461 194 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 SGSHP51688 502 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 PKNOX1P55347 436 aa6.97□□□□□ -1.29
HERC4-211ENST00000492996 MSLNQ13421 630 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms