RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SUPT7LO94864 414 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 CYP2A6P11509 494 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-216ENST00000492977 ZNF30P17039 623 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 NCF2P19878 526 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-216ENST00000492977 MNAT1P51948 309 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 UBAP2LQ14157 1087 aaKnown RBP13.92□□□□□ -0.18
PTPN7-216ENST00000492977 RAB30Q15771 203 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 PPP2R2DQ66LE6 453 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 CUZD1Q86UP6 607 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 PACS2Q86VP3 889 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 LONP2Q86WA8 852 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 ETFBKMTQ8IXQ9 262 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 NXPE1Q8N323 547 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 GPR26Q8NDV2 337 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 GIMAP7Q8NHV1 300 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 SORCS1Q8WY21 1168 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 FGF13Q92913 245 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
PTPN7-216ENST00000492977 PBXIP1Q96AQ6 731 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 SLC30A3Q99726 388 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 CIPCQ9C0C6 399 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 NKX2-4Q9H2Z4 354 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 THG1LQ9NWX6 298 aaKnown RBP13.92□□□□□ -0.18
PTPN7-216ENST00000492977 TAS2R1Q9NYW7 299 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 GTSE1Q9NYZ3 720 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 PCDHGA10Q9Y5H3 936 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 WASF2Q9Y6W5 498 aa13.92□□□□□ -0.18
PTPN7-216ENST00000492977 B2RBV5 119 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 GSC2O15499 205 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 KLK8O60259 260 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 TULP3O75386 442 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 LEFTY1O75610 366 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 GFAPP14136 432 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 UGT1A6P19224 532 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 UGT1A1P22309 533 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 UGT1A4P22310 534 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 LHCGRP22888 699 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 PRDX6P30041 224 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 UGT1A3P35503 534 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 UGT1A5P35504 534 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 ST8SIA6P61647 398 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 SATB1Q01826 763 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 TSNQ15631 228 aaKnown RBP13.91□□□□□ -0.18
PTPN7-216ENST00000492977 PFKFB4Q16877 469 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 TCEAL5Q5H9L2 206 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 RARS2Q5T160 578 aaKnown RBP13.91□□□□□ -0.18
PTPN7-216ENST00000492977 TXNDC11Q6PKC3 985 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 MACC1Q6ZN28 852 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 RINLQ6ZS11 566 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 GPR149Q86SP6 731 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 TMPRSS6Q8IU80 811 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 FBXO39Q8N4B4 442 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 TEX9Q8N6V9 391 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 PTGR2Q8N8N7 351 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-216ENST00000492977 EEF1AKMT1Q8WVE0 214 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 MYLIPQ8WY64 445 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 ULK4Q96C45 1275 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 CMTM5Q96DZ9 223 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 LINGO1Q96FE5 620 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 MAELQ96JY0 434 aaKnown RBP13.91□□□□□ -0.18
PTPN7-216ENST00000492977 OR52B2Q96RD2 323 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 NUF2Q9BZD4 464 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 C1orf21Q9H246 121 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 ELOVL2Q9NXB9 296 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 DKK3Q9UBP4 350 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 B4GALT6Q9UBX8 382 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 IL36AQ9UHA7 158 aa13.91□□□□□ -0.18
PTPN7-216ENST00000492977 HEPACAM2A8MVW5 462 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 SUPT3HB4E1H0 165 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 E9PBE3 544 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 STX16-NPEPL1H3BU86 382 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 CDC7O00311 574 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 BTN3A1O00481 513 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 STX16O14662 325 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 SLC22A2O15244 555 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 KLHL41O60662 606 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 SUPT3HO75486 399 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 ECI2O75521 394 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 ARSAP15289 507 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 EPHA3P29320 983 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 ADSLP30566 484 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-216ENST00000492977 HNRNPH1P31943 449 aaKnown RBP13.9□□□□□ -0.18
PTPN7-216ENST00000492977 VIPR1P32241 457 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 SPINT3P49223 89 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 ARHGEF7Q14155 803 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 PDGFRLQ15198 375 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 CRY1Q16526 586 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 LSM12Q3MHD2 195 aaKnown RBP13.9□□□□□ -0.18
PTPN7-216ENST00000492977 ARSIQ5FYB1 569 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 C12orf40Q86WS4 652 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 CPNE9Q8IYJ1 553 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 DTX3LQ8TDB6 740 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 EXT2Q93063 718 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 MIPEPQ99797 713 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 FAM83CQ9BQN1 747 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 BOCQ9BWV1 1114 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 C1QTNF3Q9BXJ4 246 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms