RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 STN1Q9H668 368 aaKnown RBP17.05■□□□□ 0.32
SGMS1-204ENST00000492601 TRIM39Q9HCM9 518 aa17.05■□□□□ 0.32
SGMS1-204ENST00000492601 BPIFA1Q9NP55 256 aa17.05■□□□□ 0.32
SGMS1-204ENST00000492601 PRDM8Q9NQV8 689 aa17.05■□□□□ 0.32
SGMS1-204ENST00000492601 RAD18Q9NS91 495 aa17.05■□□□□ 0.32
SGMS1-204ENST00000492601 SLC39A1Q9NY26 324 aa17.05■□□□□ 0.32
SGMS1-204ENST00000492601 B3GALT1Q9Y5Z6 326 aa17.05■□□□□ 0.32
SGMS1-204ENST00000492601 EFCAB7A8K855 629 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 STMND1H3BQB6 276 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 MTX2O75431 263 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 ZIC2O95409 532 aaPredicted RBP17.04■□□□□ 0.32
SGMS1-204ENST00000492601 F3P13726 295 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 WT1P19544 449 aaPredicted RBP17.04■□□□□ 0.32
SGMS1-204ENST00000492601 NFKB1P19838 968 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 CD68P34810 354 aaPredicted RBP17.04■□□□□ 0.32
SGMS1-204ENST00000492601 MARCKSL1P49006 195 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 NR2C2P49116 596 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 WASHC5Q12768 1159 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 NOMO1Q15155 1222 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 SLC14A2Q15849 920 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 BZW1Q7L1Q6 419 aaKnown RBP17.04■□□□□ 0.32
SGMS1-204ENST00000492601 TC2NQ8N9U0 490 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 CCDC112Q8NEF3 446 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 NCSTNQ92542 709 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 TRIM5Q9C035 493 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 B3GNT4Q9C0J1 378 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 CPNE7Q9UBL6 633 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 PCDHGA4Q9Y5G9 962 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 ADGRG1Q9Y653 693 aa17.04■□□□□ 0.32
SGMS1-204ENST00000492601 SETXQ7Z333 2677 aaKnown RBP17.03■□□□□ 0.32
SGMS1-204ENST00000492601 SLC2A4P14672 509 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 INSCQ1MX18 579 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 PDPK2PQ6A1A2 396 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 CCDC50Q8IVM0 306 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 SLC25A41Q8N5S1 370 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 EXTL1Q92935 676 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 SH3KBP1Q96B97 665 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 MED8Q96G25 268 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 TBC1D10AQ9BXI6 508 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 SCHIP1Q9P0W5 487 aaPredicted RBP17.03■□□□□ 0.32
SGMS1-204ENST00000492601 KLHL8Q9P2G9 620 aaPredicted RBP17.03■□□□□ 0.32
SGMS1-204ENST00000492601 NFKBIL1Q9UBC1 381 aaPredicted RBP17.03■□□□□ 0.32
SGMS1-204ENST00000492601 SLC23A2Q9UGH3 650 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 KLHL3Q9UH77 587 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 FAM153AQ9UHL3 310 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 DNAJC16Q9Y2G8 782 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 PCDHGA3Q9Y5H0 932 aa17.03■□□□□ 0.32
SGMS1-204ENST00000492601 FLNBO75369 2602 aaKnown RBP17.02■□□□□ 0.32
SGMS1-204ENST00000492601 KIR2DS5A0A0G2JLQ3 304 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 A0A0G2JNG1 304 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.02■□□□□ 0.32
SGMS1-204ENST00000492601 KIR2DS3K7RE56 304 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 CHUKO15111 745 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 CHRNA4P43681 627 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 HADHBP55084 474 aaKnown RBP17.02■□□□□ 0.32
SGMS1-204ENST00000492601 WNT3AP56704 352 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 CYP4F2P78329 520 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 KIR2DS5Q14953 304 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 SEPT7Q16181 437 aaKnown RBP17.02■□□□□ 0.32
SGMS1-204ENST00000492601 LINC00303Q3SY05 128 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
SGMS1-204ENST00000492601 TFDP3Q5H9I0 405 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 SIRPB2Q5JXA9 342 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 ANKS6Q68DC2 871 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 WDR74Q6RFH5 385 aaPredicted RBP17.02■□□□□ 0.32
SGMS1-204ENST00000492601 KDELC1Q6UW63 502 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 KATNAL2Q8IYT4 538 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 ZNF567Q8N184 647 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 EXD3Q8N9H8 876 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 ZSCAN1Q8NBB4 408 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 P3H4Q92791 437 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 PLEKHG4BQ96PX9 1271 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 CTRCQ99895 268 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 DDA1Q9BW61 102 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 PDP2Q9P2J9 529 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 TMPRSS11EQ9UL52 423 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 PCDHA13Q9Y5I0 950 aa17.02■□□□□ 0.32
SGMS1-204ENST00000492601 BSNQ9UPA5 3926 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 hCG_1818297A0A087WSY0 165 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 OR5K4A6NMS3 321 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 PDZK1P1A8MUH7 402 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 B4E171 279 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 GPR89AB7ZAQ6 455 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 KMOO15229 486 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 CDK14O94921 469 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 ZRANB2O95218 330 aaKnown RBP eCLIP17.01■□□□□ 0.31
SGMS1-204ENST00000492601 GPR89BP0CG08 455 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 ZNF7P17097 686 aaPredicted RBP17.01■□□□□ 0.31
SGMS1-204ENST00000492601 UGT1A3P35503 534 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 TSPAN7P41732 249 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 ATP1A2P50993 1020 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 CLCNKAP51800 687 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 EPHA4P54764 986 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 UBE2IP63279 158 aaKnown RBP17.01■□□□□ 0.31
SGMS1-204ENST00000492601 ATP13A5Q4VNC0 1218 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 DCAF12Q5T6F0 453 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 SARM1Q6SZW1 724 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 ARHGAP22Q7Z5H3 698 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 LRRTM4Q86VH4 590 aa17.01■□□□□ 0.31
SGMS1-204ENST00000492601 RCOR2Q8IZ40 523 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms