RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 A0A0G2JPF8 293 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 PLSCR5A0PG75 271 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 A8MV72 311 aaPredicted RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 HNRNPCL3B7ZW38 293 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 CLGNO14967 610 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 ANKRD28O15084 1053 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 TMCC2O75069 709 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 BEST1O76090 585 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 HNRNPCL4P0DMR1 293 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 S1PR1P21453 382 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 ACSL1P33121 698 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 APOBEC1P41238 236 aaKnown RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 NRIP1P48552 1158 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 KIF5AQ12840 1032 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 NTRK2Q16620 822 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 NSUN5P2Q63ZY6 315 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 TMEM198Q66K66 360 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 C18orf63Q68DL7 685 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 ENOSF1Q7L5Y1 443 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 SFR1Q86XK3 245 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 NRROSQ86YC3 692 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 ODF3L1Q8IXM7 274 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 ZNF34Q8IZ26 560 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 RASGEF1CQ8N431 466 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 EMC1Q8N766 993 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 ACVR1CQ8NER5 493 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 THAP6Q8TBB0 222 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 UTP15Q8TED0 518 aaKnown RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 PPP4R1Q8TF05 950 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 BICD1Q96G01 975 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 ARHGEF38Q9NXL2 777 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 MRPL15Q9P015 296 aaKnown RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 MDFICQ9P1T7 246 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 SEC63Q9UGP8 760 aaKnown RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 CHORDC1Q9UHD1 332 aaPredicted RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 PADI3Q9ULW8 664 aa3.84□□□□□ -1.79
VTA1-204ENST00000491881 EXO1Q9UQ84 846 aaKnown RBP3.84□□□□□ -1.79
VTA1-204ENST00000491881 TCF20Q9UGU0 1960 aaKnown RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 EME2A4GXA9 379 aaPredicted RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 MAGEA13PA6NCF6 341 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 SRRM3A6NNA2 597 aaPredicted RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 HNRNPCL2B2RXH8 293 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 FAM90A26D6RGX4 464 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 ZBTB43O43298 467 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 SLC28A2O43868 658 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 DDNO94850 711 aaPredicted RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 PLA2G2AP14555 144 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 UGT1A1P22309 533 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 USP8P40818 1118 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 LMAN1P49257 510 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 RRP1P56182 461 aaKnown RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 CLDN20P56880 219 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 KEAP1Q14145 624 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 ASIC2Q16515 512 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 CCDC96Q2M329 555 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 KIF19Q2TAC6 998 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 TMEM35AQ53FP2 167 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 MFSD4BQ5TF39 518 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 IRAK1BP1Q5VVH5 260 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 TRNP1Q6NT89 227 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 MAP7D3Q8IWC1 876 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 MCEMP1Q8IX19 187 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 SLC38A5Q8WUX1 472 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 FIG4Q92562 907 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 PIGTQ969N2 578 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 IGSF21Q96ID5 467 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 CEP295NLQ96MC4 621 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 DDOQ99489 341 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 SLCO5A1Q9H2Y9 848 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 OSGEPL1Q9H4B0 414 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 RAD21L1Q9H4I0 556 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 GAREM1Q9H706 876 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 PAG1Q9NWQ8 432 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 PTRH2Q9Y3E5 179 aaKnown RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 PCDHGB1Q9Y5G3 927 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 PTPRCP08575 1304 aa3.83□□□□□ -1.8
VTA1-204ENST00000491881 ZNF644Q9H582 1327 aaPredicted RBP3.83□□□□□ -1.8
VTA1-204ENST00000491881 PDS5AQ29RF7 1337 aaKnown RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 SAA2-SAA4A0A096LPE2 208 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 DENND3A2RUS2 1198 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 ACOT8O14734 319 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 FIBPO43427 364 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 PLPP2O43688 288 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 ENTPD3O75355 529 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 GH2P01242 217 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 TUBBP07437 444 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 HSP90AA1P07900 732 aaKnown RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 FGF3P11487 239 aaPredicted RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 MMP9P14780 707 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 POLR2CP19387 275 aaPredicted RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 NNMTP40261 264 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 IL15P40933 162 aaPredicted RBP3.82□□□□□ -1.8
VTA1-204ENST00000491881 AMPHP49418 695 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 STAT2P52630 851 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 COG7P83436 770 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 KRT33BQ14525 404 aa3.82□□□□□ -1.8
VTA1-204ENST00000491881 MVPQ14764 893 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms