RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 PRKAR1AP10644 381 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 TCP1P17987 556 aaKnown RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 MX2P20592 715 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 AMPD1P23109 780 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 IL4RP24394 825 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 TSPAN7P41732 249 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 CDKN2BP42772 138 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 GPR3P46089 330 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 ATP1A2P50993 1020 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 GNG11P61952 73 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 POLR2LP62875 67 aaKnown RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 FOXK1P85037 733 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 DPTQ07507 201 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 SQSTM1Q13501 440 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 PAFAH1B3Q15102 231 aaKnown RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 IGFBP7Q16270 282 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 ATP13A4Q4VNC1 1196 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 PYCR3Q53H96 274 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 ANKRD20A8PQ5CZ79 823 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 SEL1L2Q5TEA6 688 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 SPOCD1Q6ZMY3 1216 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 MARK2Q7KZI7 788 aaKnown RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 FAM129CQ86XR2 697 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 IL22RA1Q8N6P7 574 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 PAF1Q8N7H5 531 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 AGBL5Q8NDL9 886 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 RAPGEF5Q92565 580 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 FATE1Q969F0 183 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 SCRN2Q96FV2 425 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 COX14Q96I36 57 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 SLC45A3Q96JT2 553 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 ZNF599Q96NL3 588 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 WDR24Q96S15 920 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 NAP1L3Q99457 506 aaPredicted RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 CTRCQ99895 268 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 FRMD8P1Q9BZ68 369 aaPredicted RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 ABCG8Q9H221 673 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 HAUS2Q9NVX0 235 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 GOLGA6AQ9NYA3 693 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 KCNK4Q9NYG8 393 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 RNF14Q9UBS8 474 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 PPIL1Q9Y3C6 166 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 PRKAB1Q9Y478 270 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 MRPS18BQ9Y676 258 aaKnown RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 MED13Q9UHV7 2174 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 LRBAP50851 2863 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 MN1Q10571 1320 aaPredicted RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 CRYBG3Q68DQ2 2970 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 hCG_1818297A0A087WSY0 165 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 A0A0J9YYE9 177 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 CTAGE9A4FU28 777 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ZNF891A8MT65 544 aaPredicted RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 FADS2P1A8MWK0 482 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 K7EM74 188 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 INPP4BO15327 924 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 DNAJC6O75061 913 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 TRBC1P01850 177 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ATP1A1P05023 1023 aaKnown RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 CD48P09326 243 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 SFTPCP11686 197 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 TNNT1P13805 278 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 NR1D1P20393 614 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 F8A1P23610 371 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 CSTF2P33240 577 aaKnown RBP eCLIP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 GJC1P36383 396 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 HSPA9P38646 679 aaKnown RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 CASRP41180 1078 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 RENBPP51606 427 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 STC1P52823 247 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 GFERP55789 205 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 RAB15P59190 212 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ETF1P62495 437 aaKnown RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 GPLD1P80108 840 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 TUBB2AQ13885 445 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 SLC9A4Q6AI14 798 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ALG1LQ6GMV1 187 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 TMEM71Q6P5X7 295 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 MFSD7Q6UXD7 560 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 BBS12Q6ZW61 710 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 USP45Q70EL2 814 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ARHGAP22Q7Z5H3 698 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 CPNE8Q86YQ8 564 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 CCDC50Q8IVM0 306 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ATPAF2Q8N5M1 289 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 STARD8Q92502 1023 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ALG3Q92685 438 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 KRT35Q92764 455 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 RNF25Q96BH1 459 aaPredicted RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 AP2M1Q96CW1 435 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 NAPGQ99747 312 aaPredicted RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 TUBB2BQ9BVA1 445 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 TLR10Q9BXR5 811 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 TDRD1Q9BXT4 1180 aaKnown RBP8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 OSBPL8Q9BZF1 889 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 GOLPH3Q9H4A6 298 aa8.36□□□□□ -1.07
PCOLCE-209ENST00000490909 ZNF71Q9NQZ8 489 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms