RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 H2AFJQ9BTM1 129 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 MAK16Q9BXY0 300 aaKnown RBP5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 KIF9Q9HAQ2 790 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 NKIRAS2Q9NYR9 191 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 HAO1Q9UJM8 370 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF112Q9UJU3 913 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 ING1Q9UK53 422 aaPredicted RBP5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 FAM96BQ9Y3D0 163 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 RAP2CQ9Y3L5 183 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 ADAM18Q9Y3Q7 739 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 TRIP12Q14669 1992 aaPredicted RBP5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 SVILO95425 2214 aa5.01□□□□□ -1.61
SSX2IP-208ENST00000490476 COL5A1P20908 1838 aaPredicted RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 MYH13Q9UKX3 1938 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 FOXO6A8MYZ6 492 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 BCAT2O15382 392 aaPredicted RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 P4HA2O15460 535 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 ATP2C2O75185 946 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 BEST1O76090 585 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 TOP3BO95985 862 aaKnown RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 WNT1P04628 370 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 HOXC6P09630 235 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 IL7RP16871 459 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 ACSL1P33121 698 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 RFC1P35251 1148 aaPredicted RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 CLDN2P57739 230 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 HSF1Q00613 529 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 SLC18A2Q05940 514 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 HYAL1Q12794 435 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 ACVR2BQ13705 512 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 RNPS1Q15287 305 aaKnown RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 HIST2H2ACQ16777 129 aaPredicted RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 GKAP1Q5VSY0 366 aaPredicted RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 FBXO42Q6P3S6 717 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 TMEM154Q6P9G4 183 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF782Q6ZMW2 699 aaPredicted RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 FAM57BQ71RH2 274 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 TBC1D26Q86UD7 250 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 DDIASQ8IXT1 998 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 CADM3Q8N126 398 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 LSMEM1Q8N8F7 131 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 BOLLQ8N9W6 283 aaKnown RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 GPRC5AQ8NFJ5 357 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 HDAC7Q8WUI4 952 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 PSPC1Q8WXF1 523 aaKnown RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 ZC3HAV1LQ96H79 300 aaKnown RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 SIN3AQ96ST3 1273 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 YME1L1Q96TA2 773 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 SH2D3AQ9BRG2 576 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 WDR6Q9NNW5 1121 aaKnown RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 SLC6A13Q9NSD5 602 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 NCKIPSDQ9NZQ3 722 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNHIT2Q9UHR6 403 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 ROCK2O75116 1388 aaKnown RBP5□□□□□ -1.61
SSX2IP-208ENST00000490476 SPAG17Q6Q759 2223 aa5□□□□□ -1.61
SSX2IP-208ENST00000490476 ELP1O95163 1332 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 KIF16BQ96L93 1317 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 A0A1W2PQ09 198 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 FRMD3A2A2Y4 597 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 CBY3A6NI87 242 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 USP17L23D6RBM5 183 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 LINC01565O15544 149 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 PAGE4O60829 102 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 LCKP06239 509 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 SLC16A2P36021 539 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 F2RL1P55085 397 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 CDH8P55286 799 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 TROAPQ12815 778 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 KLF10Q13118 480 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 FGFBP1Q14512 234 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 ALG11Q2TAA5 492 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 TXNDC8Q6A555 127 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF280DQ6N043 979 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 CRELD2Q6UXH1 353 aaPredicted RBP4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 ZNF793Q6ZN11 406 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 CHST9Q7L1S5 443 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 DEFB128Q7Z7B8 93 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 CNGA4Q8IV77 575 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 SCYL3Q8IZE3 742 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 ZCCHC9Q8N567 271 aaKnown RBP4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 AMER2Q8N7J2 671 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 OR4N2Q8NGD1 307 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 EME1Q96AY2 570 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 MMABQ96EY8 250 aaPredicted RBP4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 GLT1D1Q96MS3 346 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 SERINC2Q96SA4 455 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 SLF1Q9BQI6 1058 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 LHPPQ9H008 270 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 IKZF4Q9H2S9 585 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 TMEM45AQ9NWC5 275 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 CARD8Q9Y2G2 431 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 SNX8Q9Y5X2 465 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 ATRQ13535 2644 aa4.99□□□□□ -1.61
SSX2IP-208ENST00000490476 ATMQ13315 3056 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 A0A096LPK6 155 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 TRBV5-7A0A0A0MS05 114 aa4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 A0A0U1RQG5 324 aaPredicted RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 A8MV72 311 aaPredicted RBP4.98□□□□□ -1.61
SSX2IP-208ENST00000490476 NPIPB11E5RHQ5 1161 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms