RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	MED4	Q9NPJ6	270 aa		18.05	■□□□□ 0.48
SRM-206	ENST00000490101	IARS2	Q9NSE4	1012 aa	Known RBP	18.05	■□□□□ 0.48
SRM-206	ENST00000490101	SCML1	Q9UN30	329 aa		18.05	■□□□□ 0.48
SRM-206	ENST00000490101	IKBKG	Q9Y6K9	419 aa		18.05	■□□□□ 0.48
SRM-206	ENST00000490101	SMIM23	A6NLE4	172 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101		A8MX80	341 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	CCL22	O00626	93 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	AP1G1	O43747	822 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	UGT1A9	O60656	530 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	GOT2	P00505	430 aa	Known RBP	18.04	■□□□□ 0.48
SRM-206	ENST00000490101	SLC4A1	P02730	911 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	IGHV4-34	P06331	123 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	SERPINB9	P50453	376 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	XIAP	P98170	497 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	IL9R	Q01113	521 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	SEMG2	Q02383	582 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	CCDC15	Q0P6D6	951 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	SUZ12	Q15022	739 aa	Known RBP	18.04	■□□□□ 0.48
SRM-206	ENST00000490101	TMEM52B	Q4KMG9	183 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	CCDC157	Q569K6	752 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	TNFAIP8L3	Q5GJ75	292 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	AGBL2	Q5U5Z8	902 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	ZDHHC20	Q5W0Z9	365 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	AFTPH	Q6ULP2	937 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	USP30	Q70CQ3	517 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	GLRX5	Q86SX6	157 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	AADAT	Q8N5Z0	425 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	GOLGA6L1	Q8N7Z2	621 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	OR4L1	Q8NH43	312 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	BAHD1	Q8TBE0	780 aa	Predicted RBP	18.04	■□□□□ 0.48
SRM-206	ENST00000490101	SCG3	Q8WXD2	468 aa	Known RBP	18.04	■□□□□ 0.48
SRM-206	ENST00000490101	FAM131C	Q96AQ9	280 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	ARL8A	Q96BM9	186 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	ZBTB9	Q96C00	473 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	MRRF	Q96E11	262 aa	Known RBP	18.04	■□□□□ 0.48
SRM-206	ENST00000490101	AGAP2	Q99490	1192 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	CPNE1	Q99829	537 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	OMD	Q99983	421 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	SUDS3	Q9H7L9	328 aa	Predicted RBP	18.04	■□□□□ 0.48
SRM-206	ENST00000490101	UGT1A7	Q9HAW7	530 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	UGT1A10	Q9HAW8	530 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	UGT1A8	Q9HAW9	530 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	BPIFA1	Q9NP55	256 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	FAM53C	Q9NYF3	392 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	FKBPL	Q9UIM3	349 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	PCDHGB2	Q9Y5G2	931 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	PSAT1	Q9Y617	370 aa		18.04	■□□□□ 0.48
SRM-206	ENST00000490101	PLXNA2	O75051	1894 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	RGSL1	A5PLK6	1076 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	GOLGA8K	D6RF30	607 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101		H0Y8X5	98 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	GOLGA8T	H3BQL2	631 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	PSMD11	O00231	422 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	PLK4	O00444	970 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	RGS16	O15492	202 aa	Predicted RBP	18.03	■□□□□ 0.48
SRM-206	ENST00000490101	C1S	P09871	688 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	BPI	P17213	487 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	GP5	P40197	560 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	SPINT3	P49223	89 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	CCT8	P50990	548 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	CSE1L	P55060	971 aa	Known RBP	18.03	■□□□□ 0.48
SRM-206	ENST00000490101	C21orf59	P57076	290 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	SFSWAP	Q12872	951 aa	Known RBP	18.03	■□□□□ 0.48
SRM-206	ENST00000490101	PEX6	Q13608	980 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	HSP90B2P	Q58FF3	399 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	PIP5KL1	Q5T9C9	394 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	GRTP1	Q5TC63	336 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	PACS1	Q6VY07	963 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	LIPI	Q6XZB0	460 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	PTAR1	Q7Z6K3	402 aa	Predicted RBP	18.03	■□□□□ 0.48
SRM-206	ENST00000490101	GALNT7	Q86SF2	657 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	SLC6A18	Q96N87	628 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	CDC6	Q99741	560 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	ORAI3	Q9BRQ5	295 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	RAD18	Q9NS91	495 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	SLC17A6	Q9P2U8	582 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	18.03	■□□□□ 0.48
SRM-206	ENST00000490101	APPL1	Q9UKG1	709 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	FBXO5	Q9UKT4	447 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	FADS3	Q9Y5Q0	445 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	ATRX	P46100	2492 aa		18.03	■□□□□ 0.48
SRM-206	ENST00000490101	OR51F1	A6NGY5	319 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	LRRC72	A6NJI9	287 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	TAF4	O00268	1085 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	CD3EAP	O15446	510 aa	Known RBP	18.02	■□□□□ 0.48
SRM-206	ENST00000490101	CNTF	P26441	200 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	FOXN2	P32314	431 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	CTSK	P43235	329 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	SMAD1	Q15797	465 aa	Known RBP	18.02	■□□□□ 0.48
SRM-206	ENST00000490101	LGSN	Q5TDP6	509 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	AGBL4	Q5VU57	503 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	ZNF470	Q6ECI4	717 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	MRNIP	Q6NTE8	343 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	DBX2	Q6ZNG2	339 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	STRA8	Q7Z7C7	330 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	C2CD4A	Q8NCU7	369 aa	Predicted RBP	18.02	■□□□□ 0.48
SRM-206	ENST00000490101	DTX3L	Q8TDB6	740 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	PLEKHG4B	Q96PX9	1271 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	TCF12	Q99081	682 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	MCMBP	Q9BTE3	642 aa		18.02	■□□□□ 0.48

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