RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 HMGCLP35914 325 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 KLF1Q13351 362 aaPredicted RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 PTPRCAPQ14761 206 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 SLC1A5Q15758 541 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 CLPPQ16740 277 aaPredicted RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 MAP9Q49MG5 647 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ZNF658BQ4V348 819 aaPredicted RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ATP13A5Q4VNC0 1218 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ZNF569Q5MCW4 686 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 KIAA1614Q5VZ46 1190 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 PDPK2PQ6A1A2 396 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 DENND5AQ6IQ26 1287 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 IYDQ6PHW0 289 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 FOXR1Q6PIV2 292 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 KDELC2Q7Z4H8 507 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ARHGAP22Q7Z5H3 698 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ZC3H18Q86VM9 953 aaKnown RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ZFAND4Q86XD8 727 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 CCDC170Q8IYT3 715 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 PAF1Q8N7H5 531 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 DTX3LQ8TDB6 740 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 TFB1MQ8WVM0 346 aaKnown RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ZSCAN5AQ9BUG6 496 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 OR2AG1Q9H205 316 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 GBA3Q9H227 469 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 SARS2Q9NP81 518 aaKnown RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 IL26Q9NPH9 171 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 PKD2L2Q9NZM6 624 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 SEPT10Q9P0V9 454 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 PCDHGA3Q9Y5H0 932 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 PRRC2CQ9Y520 2896 aaKnown RBP11.66□□□□□ -0.54
SRSF4-204ENST00000489898 LILRA5A6NI73 299 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 AGAP14A8MT82 685 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 HGSO14964 777 aaPredicted RBP11.66□□□□□ -0.54
SRSF4-204ENST00000489898 GRID2O43424 1007 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 SLC4A1P02730 911 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 TNNT1P13805 278 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 MPSTP25325 297 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 CTNNA2P26232 953 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 RBL1P28749 1068 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 CTSCP53634 463 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 GFERP55789 205 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 VAC14Q08AM6 782 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 PLA2G4EQ3MJ16 856 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 LINC00303Q3SY05 128 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 AMZ1Q400G9 498 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 ARHGAP40Q5TG30 622 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 KAZNQ674X7 775 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 FAM83HQ6ZRV2 1179 aaPredicted RBP11.66□□□□□ -0.54
SRSF4-204ENST00000489898 USP53Q70EK8 1073 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 CHST15Q7LFX5 561 aaPredicted RBP11.66□□□□□ -0.54
SRSF4-204ENST00000489898 VASH2Q86V25 355 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 LSM14AQ8ND56 463 aaKnown RBP11.66□□□□□ -0.54
SRSF4-204ENST00000489898 GPR150Q8NGU9 434 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 ACTL9Q8TC94 416 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.66□□□□□ -0.54
SRSF4-204ENST00000489898 NAT14Q8WUY8 206 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 SLC39A7Q92504 469 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 FAM118BQ9BPY3 351 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 ADGRE3Q9BY15 652 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 B3GNT4Q9C0J1 378 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 RMI1Q9H9A7 625 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 PRDM8Q9NQV8 689 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 SMOXQ9NWM0 555 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 OCIAD1Q9NX40 245 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 WDR37Q9Y2I8 494 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 PCDHA3Q9Y5H8 950 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 SLC30A1Q9Y6M5 507 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 CAPN6Q9Y6Q1 641 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 SPTA1P02549 2419 aa11.66□□□□□ -0.54
SRSF4-204ENST00000489898 TNRC6AQ8NDV7 1962 aaKnown RBP11.65□□□□□ -0.54
SRSF4-204ENST00000489898 FLNBO75369 2602 aaKnown RBP11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TK2O00142 265 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 DDX3YO15523 660 aaKnown RBP11.65□□□□□ -0.54
SRSF4-204ENST00000489898 EPOP01588 193 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 C9P02748 559 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 RBMS1P29558 406 aaKnown RBP11.65□□□□□ -0.54
SRSF4-204ENST00000489898 ALDH4A1P30038 563 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 SLC19A1P41440 591 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 UCNP55089 124 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 PPP1CAP62136 330 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 XIAPP98170 497 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 OTUD4Q01804 1114 aaKnown RBP11.65□□□□□ -0.54
SRSF4-204ENST00000489898 HHEXQ03014 270 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TFDP2Q14188 446 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 KCTD11Q693B1 232 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 CRTC3Q6UUV7 619 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 RANBP10Q6VN20 620 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 PHYKPLQ8IUZ5 450 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 DDHD1Q8NEL9 900 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 USP7Q93009 1102 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TMEM159Q96B96 161 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TIMM29Q9BSF4 260 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TBC1D10AQ9BXI6 508 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TRIM5Q9C035 493 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 STRADBQ9C0K7 418 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 TRIM39Q9HCM9 518 aa11.65□□□□□ -0.54
SRSF4-204ENST00000489898 APMAPQ9HDC9 416 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms