RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SPATA19Q7Z5L4 167 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 CAMKMTQ7Z624 323 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 PIP4P1Q86T03 277 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 HOOK3Q86VS8 718 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 C16orf71Q8IYS4 520 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 FBXW8Q8N3Y1 598 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 CAMKVQ8NCB2 501 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 GTF3C6Q969F1 213 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 VPS50Q96JG6 964 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 GDAP1L1Q96MZ0 367 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 RAB3IPQ96QF0 476 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 MGME1Q9BQP7 344 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 ELOVL1Q9BW60 279 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 SLC5A7Q9GZV3 580 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 SAP30LQ9HAJ7 183 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 TRIM36Q9NQ86 728 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 IARS2Q9NSE4 1012 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 ZBTB40Q9NUA8 1239 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 OLAHQ9NV23 265 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 PAG1Q9NWQ8 432 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 GAR1Q9NY12 217 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 HAO2Q9NYQ3 351 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 PLK2Q9NYY3 685 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 OSGIN1Q9UJX0 560 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 NFU1Q9UMS0 254 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 OSGIN2Q9Y236 505 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 CLCA3PQ9Y6N3 262 aa3.22□□□□□ -1.89
DEPDC1-204ENST00000489862 RIMS1Q86UR5 1692 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 A0A1B0GVM2 712 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 MYMKA6NI61 221 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 KPNA7A9QM74 516 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ST8SIA3O43173 380 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 CEP104O60308 925 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 RTN2O75298 545 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 AKAP3O75969 853 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 MMP2P08253 660 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 CYP3A4P08684 503 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 TMEM191BP0C7N4 346 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PDHBP11177 359 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 EEF2P13639 858 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 CD19P15391 556 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 DNASE1P24855 282 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 CASP3P42574 277 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ARCN1P48444 511 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ATXN3P54252 364 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PNLIPRP2P54317 469 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 KCNJ10P78508 379 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 B4GALNT1Q00973 533 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ID2Q02363 134 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 GCNT1Q02742 428 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 CFHR1Q03591 330 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 GRSF1Q12849 480 aaKnown RBP eCLIP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 RALGDSQ12967 914 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 MRPL28Q13084 256 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 SEMA3BQ13214 749 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 BYSLQ13895 437 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 FGFBP1Q14512 234 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PGM5Q15124 567 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PMS2CLQ68D20 193 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ARHGAP11AQ6P4F7 1023 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 MOXD1Q6UVY6 613 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 VSTM1Q6UX27 236 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 RGS9BPQ6ZS82 235 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 INTS8Q75QN2 995 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 LPCAT2Q7L5N7 544 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 RHPN2Q8IUC4 686 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 RBM15BQ8NDT2 890 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 CNNM3Q8NE01 707 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 SETD9Q8NE22 299 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 OR52E1Q8NGJ3 308 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PTPMT1Q8WUK0 201 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 IGFBPL1Q8WX77 278 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PRCCQ92733 491 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 VCPIP1Q96JH7 1222 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ZNF830Q96NB3 372 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 MAP7D2Q96T17 732 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PIMREGQ9BSJ6 248 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 TRIM31Q9BZY9 425 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 TKTL2Q9H0I9 626 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ISCUQ9H1K1 167 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 HRH4Q9H3N8 390 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 EBF3Q9H4W6 596 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PDZD7Q9H5P4 517 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 TXLNGQ9NUQ3 528 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 FBXO28Q9NVF7 368 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 TMLHEQ9NVH6 421 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 SOHLH2Q9NX45 425 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 OGFRQ9NZT2 677 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 HEY2Q9UBP5 337 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 ARMCX3Q9UH62 379 aaPredicted RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 IL19Q9UHD0 177 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 HPCAL4Q9UM19 191 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 PPIEQ9UNP9 301 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 KDRP35968 1356 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 NAIPQ13075 1403 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 SHANK2Q9UPX8 1470 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 VWDEQ8N2E2 1590 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 CROCC2H7BZ55 1655 aa3.21□□□□□ -1.9
DEPDC1-204ENST00000489862 SYNJ2BP-COX16A0A087WUM0 186 aa3.2□□□□□ -1.9
DEPDC1-204ENST00000489862 GPR75-ASB3A0A0A6YYF3 556 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms