RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 CSHL1Q14406 222 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 NXNL1Q96CM4 212 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 SIPA1Q96FS4 1042 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 VPS35Q96QK1 796 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 GPR21Q99679 349 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 NMRAL1Q9HBL8 299 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 IGSF5Q9NSI5 407 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 THEGQ9P2T0 379 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 MRPS17Q9Y2R5 130 aaKnown RBP21.44■■□□□ 1.02
SMC4-221ENST00000489573 OAS3Q9Y6K5 1087 aaKnown RBP21.44■■□□□ 1.02
SMC4-221ENST00000489573 ATG2BQ96BY7 2078 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 WDR91A4D1P6 747 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 E5RI56 91 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 DLL1O00548 723 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 APOA4P06727 396 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 CCDC166P0CW27 439 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 CHRNB1P11230 501 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 ZNF37AP17032 561 aaPredicted RBP21.44■■□□□ 1.02
SMC4-221ENST00000489573 LRRC32Q14392 662 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 FAM83EQ2M2I3 478 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 SETMARQ53H47 684 aaPredicted RBP21.44■■□□□ 1.02
SMC4-221ENST00000489573 AGAP9Q5VTM2 703 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 LRRC8EQ6NSJ5 796 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 TMEM207Q6UWW9 146 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 TMEM92Q6UXU6 159 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 MACC1Q6ZN28 852 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 DDHD1Q8NEL9 900 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 FAM136AQ96C01 138 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 SCYL1Q96KG9 808 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 UBXN10Q96LJ8 280 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 SYTL2Q9HCH5 934 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 WNT16Q9UBV4 365 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 TRMT6Q9UJA5 497 aaKnown RBP21.44■■□□□ 1.02
SMC4-221ENST00000489573 FBXL21Q9UKT6 434 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 MTF2Q9Y483 593 aaPredicted RBP21.44■■□□□ 1.02
SMC4-221ENST00000489573 PRSS21Q9Y6M0 314 aa21.44■■□□□ 1.02
SMC4-221ENST00000489573 PCDH8O95206 1070 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 CHRM3P20309 590 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 CRY1Q16526 586 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 UGT3A1Q6NUS8 523 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 Q6ZS52 159 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.43■■□□□ 1.02
SMC4-221ENST00000489573 ZNF687Q8N1G0 1237 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 SYNPOQ8N3V7 929 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 SPATA6LQ8N4H0 392 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 HEXDCQ8WVB3 486 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 ANKRD49Q8WVL7 239 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 BTN2A2Q8WVV5 523 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 CHMP6Q96FZ7 201 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 MRGPRX1Q96LB2 322 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 GPR78Q96P69 363 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 EPN3Q9H201 632 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 KCTD5Q9NXV2 234 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 MID2Q9UJV3 735 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 PLXNB3Q9ULL4 1909 aa21.43■■□□□ 1.02
SMC4-221ENST00000489573 TCRBV21S2A2A0A5A6 115 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 GMNCA6NCL1 334 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 C19orf67A6NJJ6 358 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 CFAP99D6REC4 459 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 BIRC5O15392 142 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 PLRG1O43660 514 aaKnown RBP21.42■■□□□ 1.02
SMC4-221ENST00000489573 TM7SF2O76062 418 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 BPGMP07738 259 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 TARSP26639 723 aaKnown RBP21.42■■□□□ 1.02
SMC4-221ENST00000489573 AKT1P31749 480 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 SKIV2L2P42285 1042 aaKnown RBP21.42■■□□□ 1.02
SMC4-221ENST00000489573 GLRBP48167 497 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 SEC24CP53992 1094 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 B4GALNT1Q00973 533 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 DPTQ07507 201 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 SFSWAPQ12872 951 aaKnown RBP21.42■■□□□ 1.02
SMC4-221ENST00000489573 LDLRAP1Q5SW96 308 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 KLC3Q6P597 504 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 RGS9BPQ6ZS82 235 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 USP30Q70CQ3 517 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 KBTBD6Q86V97 674 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 NLRP8Q86W28 1048 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 SPNS2Q8IVW8 549 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 CLDN19Q8N6F1 224 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 LRRC8CQ8TDW0 803 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 GLYATL1Q969I3 302 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 DCUN1D1Q96GG9 259 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 SHDQ96IW2 340 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 ZNF317Q96PQ6 595 aaPredicted RBP21.42■■□□□ 1.02
SMC4-221ENST00000489573 GALPQ9UBC7 116 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 FZD4Q9ULV1 537 aa21.42■■□□□ 1.02
SMC4-221ENST00000489573 KRBA1A5PL33 1030 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 IQCF5A8MTL0 148 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 TCP11X1B4DZS4 312 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 ACADMP11310 421 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 NEFHP12036 1026 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 NDUFV2P19404 249 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 PAQR3Q6TCH7 311 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 KIAA1324Q6UXG2 1013 aaKnown RBP21.41■■□□□ 1.02
SMC4-221ENST00000489573 FSTL5Q8N475 847 aaPredicted RBP21.41■■□□□ 1.02
SMC4-221ENST00000489573 SIDT2Q8NBJ9 832 aaKnown RBP21.41■■□□□ 1.02
SMC4-221ENST00000489573 OR14C36Q8NHC7 312 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 RDH11Q8TC12 318 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 CD200R1Q8TD46 325 aa21.41■■□□□ 1.02
SMC4-221ENST00000489573 MECRQ9BV79 373 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms