RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 MR1Q95460 341 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
SSBP1-212ENST00000489378 A0A0U1RQS6 177 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 UBXN7O94888 489 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 NEFLP07196 543 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 STSP08842 583 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 FOLR1P15328 257 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 NELFEP18615 380 aaKnown RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 HTR1EP28566 365 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 VIPR1P32241 457 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 KRT9P35527 623 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 SCNN1AP37088 669 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 GPR1P46091 355 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 GABRB2P47870 512 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 VAV2P52735 878 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 YBEYP58557 167 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 POLR2LP62875 67 aaKnown RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 UBE2IP63279 158 aaKnown RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 SRSF11Q05519 484 aaKnown RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 LRRC63Q05C16 580 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 GPS2Q13227 327 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 TUBB3Q13509 450 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 CDO1Q16878 200 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 C15orf59Q2T9L4 293 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 PARP15Q460N3 678 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 CACHD1Q5VU97 1274 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 LYPLAL1Q5VWZ2 237 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 IZUMO3Q5VZ72 239 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 IGFL3Q6UXB1 125 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 ADAMTSL4Q6UY14 1074 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 Q6ZS92 163 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 MED25Q71SY5 747 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 CHST15Q7LFX5 561 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 PRSS42Q7Z5A4 293 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 PYROXD2Q8N2H3 581 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 ENDOVQ8N8Q3 282 aaKnown RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 SHC3Q92529 594 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 RSC1A1Q92681 617 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 C18orf8Q96DM3 657 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 PLEKHG4BQ96PX9 1271 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 HERPUD2Q9BSE4 406 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 CHST8Q9H2A9 424 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 ZBTB20Q9HC78 741 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-212ENST00000489378 PDE7BQ9NP56 450 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 ZNHIT2Q9UHR6 403 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 CD84Q9UIB8 345 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 RARRES3Q9UL19 164 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 SNX7Q9UNH6 387 aa9.04□□□□□ -0.96
SSBP1-212ENST00000489378 MAP1AP78559 2803 aaPredicted RBP9.03□□□□□ -0.96
SSBP1-212ENST00000489378 KIR2DS5A0A0G2JLQ3 304 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 A0A0G2JNG1 304 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 A0A1B0GUH1 482 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 WASH4PA8MWX3 477 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 KIR2DS3K7RE56 304 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 PRAMEF11O60813 436 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 DNAJC6O75061 913 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 PNMA6AP0CW24 399 aaPredicted RBP9.03□□□□□ -0.96
SSBP1-212ENST00000489378 ACP5P13686 325 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 F3P13726 295 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 EDN3P14138 238 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 AMD1P17707 334 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 EPHB2P29323 1055 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 RRADP55042 308 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 PPP1CAP62136 330 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 PDE1BQ01064 536 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 DPTQ07507 201 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 KIR2DS5Q14953 304 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 ZNF630Q2M218 657 aaPredicted RBP9.03□□□□□ -0.96
SSBP1-212ENST00000489378 CERS6Q6ZMG9 384 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 BNC2Q6ZN30 1099 aaPredicted RBP9.03□□□□□ -0.96
SSBP1-212ENST00000489378 TMEM26Q6ZUK4 368 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 ENOSF1Q7L5Y1 443 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 TECPR1Q7Z6L1 1165 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 TSPAN33Q86UF1 283 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 SLC38A9Q8NBW4 561 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 GRHL3Q8TE85 626 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 SCAMP4Q969E2 229 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 CEP63Q96MT8 703 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 AGAP2Q99490 1192 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 CRACR2AQ9BSW2 395 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 CHST11Q9NPF2 352 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 KCTD5Q9NXV2 234 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 SCHIP1Q9P0W5 487 aaPredicted RBP9.03□□□□□ -0.96
SSBP1-212ENST00000489378 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 AJAP1Q9UKB5 411 aaPredicted RBP9.03□□□□□ -0.96
SSBP1-212ENST00000489378 TCFL5Q9UL49 500 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 CSAG2Q9Y5P2 127 aa9.03□□□□□ -0.96
SSBP1-212ENST00000489378 IGHV5-51A0A0C4DH38 117 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 FAM237AA0A1B0GTK4 181 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 NPIPB15A6NHN6 443 aaPredicted RBP9.02□□□□□ -0.97
SSBP1-212ENST00000489378 ASMTLO95671 621 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 ATP1A1P05023 1023 aaKnown RBP9.02□□□□□ -0.97
SSBP1-212ENST00000489378 FBXO45P0C2W1 286 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 EBLN1P0CF75 366 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 SSTR2P30874 369 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 PNOCQ13519 176 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF235Q14590 738 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 CCDC14Q49A88 953 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 COBLL1Q53SF7 1204 aa9.02□□□□□ -0.97
SSBP1-212ENST00000489378 VWA2Q5GFL6 755 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms