RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 OXNAD1Q96HP4 312 aaPredicted RBP11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 RBM41Q96IZ5 413 aaKnown RBP11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 PANX2Q96RD6 677 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 SRPK1Q96SB4 655 aaKnown RBP11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 OSGEPL1Q9H4B0 414 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 SARS2Q9NP81 518 aaKnown RBP11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 LUC7LQ9NQ29 371 aaKnown RBP11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 KLC4Q9NSK0 619 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 TMPRSS11EQ9UL52 423 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
CCHCR1-215ENST00000488920 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 HACD1B0YJ81 288 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 H7C0C1 242 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 CHUKO15111 745 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 BUD23O43709 281 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 NDUFA10O95299 355 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 EPOP01588 193 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 THRAP10827 490 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 LIPCP11150 499 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 F3P13726 295 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 CSTF2P33240 577 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 TNNT3P45378 269 aaPredicted RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 MAPK9P45984 424 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 ATP5OP48047 213 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 NAP1L1P55209 391 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 TRA2AQ13595 282 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 PLA2G4EQ3MJ16 856 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 ATP13A5Q4VNC0 1218 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 KHDC1Q4VXA5 237 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 CCDC181Q5TID7 509 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 PDPK2PQ6A1A2 396 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 BBS12Q6ZW61 710 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 SLC9B2Q86UD5 537 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 VASH2Q86V25 355 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 AGBL5Q8NDL9 886 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 IPMKQ8NFU5 416 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 JPH3Q8WXH2 748 aaPredicted RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 NCSTNQ92542 709 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 TTC9Q92623 222 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 PMEPA1Q969W9 287 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 SH3KBP1Q96B97 665 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 MRGPRX2Q96LB1 330 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 QKIQ96PU8 341 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 FCRL5Q96RD9 977 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 TAAR9Q96RI9 348 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 VAT1Q99536 393 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 DPYSL5Q9BPU6 564 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 HERPUD2Q9BSE4 406 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 IL26Q9NPH9 171 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 OCIAD1Q9NX40 245 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 SCHIP1Q9P0W5 487 aaPredicted RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 NFKBIL1Q9UBC1 381 aaPredicted RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 CPNE7Q9UBL6 633 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 RSPH14Q9UHP6 348 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 DNAJC16Q9Y2G8 782 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 PCDHB11Q9Y5F2 797 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 PCDHA3Q9Y5H8 950 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 ARHGEF17Q96PE2 2063 aaPredicted RBP11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 KALRNO60229 2985 aa11.78□□□□□ -0.52
CCHCR1-215ENST00000488920 ATMQ13315 3056 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 KIR2DS5A0A0G2JLQ3 304 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 A0A0G2JNG1 304 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 EFCAB7A8K855 629 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 GPR89AB7ZAQ6 455 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 KIR2DS3K7RE56 304 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 KMOO15229 486 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 DUX1O43812 170 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 VEGFDO43915 354 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A9O60656 530 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 CDK14O94921 469 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 AGTP01019 485 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 GPR89BP0CG08 455 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 SLC2A4P14672 509 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 ZNF7P17097 686 aaPredicted RBP11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A6P19224 532 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A1P22309 533 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A4P22310 534 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 RBL1P28749 1068 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A3P35503 534 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 HMGCLP35914 325 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 CLCNKAP51800 687 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 LY6DQ14210 128 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 KIR2DS5Q14953 304 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 SLC1A5Q15758 541 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 CHRNA6Q15825 494 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 SEPT7Q16181 437 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 PPP2R5EQ16537 467 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 INSCQ1MX18 579 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 MANEAQ5SRI9 462 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 WDR74Q6RFH5 385 aaPredicted RBP11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 RAD9BQ6WBX8 426 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 LRRTM4Q86VH4 590 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 FAM129CQ86XR2 697 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 TMTC1Q8IUR5 882 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 ZNF547Q8IVP9 402 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 ZNF843Q8N446 348 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 TTC30BQ8N4P2 665 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 GDAP1Q8TB36 358 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 BLOC1S5Q8TDH9 187 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 ART4Q93070 314 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms