RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 FBXO39Q8N4B4 442 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 CCDC110Q8TBZ0 833 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 SPATA13Q96N96 652 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 APOL2Q9BQE5 337 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 NUDT22Q9BRQ3 303 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ZMYND15Q9H091 742 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 OSGEPL1Q9H4B0 414 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 TRIM39Q9HCM9 518 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 LOXL2Q9Y4K0 774 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ZFC3H1O60293 1989 aaKnown RBP17.53■□□□□ 0.4
ITGB1-215ENST00000488494 TRBV23OR9-2A0A075B6M9 112 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 A6NCN8 305 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 GOLGA6L9A6NEM1 432 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 CDRT15L2A8MXV6 281 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 GPR89AB7ZAQ6 455 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 ZW10O43264 779 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 CPNE6O95741 557 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 GPR89BP0CG08 455 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 CSF2RBP32927 897 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 UGT1A5P35504 534 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 SPAM1P38567 509 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 MLLT3P42568 568 aaPredicted RBP17.53■□□□□ 0.4
ITGB1-215ENST00000488494 GPR3P46089 330 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 FASLGP48023 281 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 ATP13A5Q4VNC0 1218 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 GDAP1Q8TB36 358 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 KCNE4Q8WWG9 221 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 VPS35Q96QK1 796 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 SEMA6CQ9H3T2 930 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 IL26Q9NPH9 171 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 KCNK4Q9NYG8 393 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 IL17CQ9P0M4 197 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 PISDQ9UG56 409 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 TMPRSS11EQ9UL52 423 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 PKP3Q9Y446 797 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 KIF26BQ2KJY2 2108 aa17.53■□□□□ 0.4
ITGB1-215ENST00000488494 IGHV1OR21-1A0A087WYE8 117 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 CHUKO15111 745 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 JMJD7P0C870 316 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 CD1CP29017 333 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 NFATC2Q13469 925 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 PRPSAP1Q14558 356 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 INSCQ1MX18 579 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 NKAIN2Q5VXU1 208 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 ZDHHC20Q5W0Z9 365 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 USP53Q70EK8 1073 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 CLEC14AQ86T13 490 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 PIM3Q86V86 326 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 JAMLQ86YT9 394 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 HES6Q96HZ4 224 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 TSGA10Q9BZW7 698 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 KLC4Q9NSK0 619 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 R3HDM2Q9Y2K5 976 aaKnown RBP17.52■□□□□ 0.4
ITGB1-215ENST00000488494 AAR2Q9Y312 384 aaKnown RBP17.52■□□□□ 0.4
ITGB1-215ENST00000488494 ARL5AQ9Y689 179 aa17.52■□□□□ 0.4
ITGB1-215ENST00000488494 ZNF106Q9H2Y7 1883 aaKnown RBP17.52■□□□□ 0.39
ITGB1-215ENST00000488494 GLYATL1P3A0A0U1RQE8 302 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 TCRBV7S2A1N4TA0A589 114 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 VEGFDO43915 354 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 ZNF189O75820 626 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-215ENST00000488494 F3P13726 295 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 SLC2A4P14672 509 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 ADRA1AP35348 466 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 PPM1FP49593 454 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-215ENST00000488494 HHEXQ03014 270 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 KLF1Q13351 362 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-215ENST00000488494 CHRNA6Q15825 494 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-215ENST00000488494 LRRTM4Q86VH4 590 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 TRAPPC5Q8IUR0 188 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 ZNF547Q8IVP9 402 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 FAM71DQ8N9W8 422 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 TTC13Q8NBP0 860 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 CCDC74BQ96LY2 380 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 SLC38A3Q99624 504 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 STN1Q9H668 368 aaKnown RBP17.51■□□□□ 0.39
ITGB1-215ENST00000488494 SARS2Q9NP81 518 aaKnown RBP17.51■□□□□ 0.39
ITGB1-215ENST00000488494 SLC23A2Q9UGH3 650 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 DNAJC16Q9Y2G8 782 aa17.51■□□□□ 0.39
ITGB1-215ENST00000488494 GAPDHSO14556 408 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-215ENST00000488494 KMOO15229 486 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 KLK10O43240 276 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 CDK14O94921 469 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 ZNF7P17097 686 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-215ENST00000488494 ITIH1P19827 911 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 GTF2H3Q13889 308 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 PTPRCAPQ14761 206 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 C16orf72Q14CZ0 275 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 SEPT7Q16181 437 aaKnown RBP17.5■□□□□ 0.39
ITGB1-215ENST00000488494 CLPPQ16740 277 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-215ENST00000488494 IYDQ6PHW0 289 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 RANBP10Q6VN20 620 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 ARHGEF18Q6ZSZ5 1173 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 RNF10Q8N5U6 811 aaKnown RBP17.5■□□□□ 0.39
ITGB1-215ENST00000488494 RCBTB1Q8NDN9 531 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 TMEM159Q96B96 161 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 FCRL3Q96P31 734 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-215ENST00000488494 PPP1R2P1Q96PQ5 205 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 CMKLR1Q99788 373 aa17.5■□□□□ 0.39
ITGB1-215ENST00000488494 TBL1YQ9BQ87 522 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms