RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 WDR75Q8IWA0 830 aaKnown RBP20.05■□□□□ 0.8
NECAB3-213ENST00000488489 CLDN19Q8N6F1 224 aa20.05■□□□□ 0.8
NECAB3-213ENST00000488489 CD200R1Q8TD46 325 aa20.05■□□□□ 0.8
NECAB3-213ENST00000488489 KCNJ9Q92806 393 aa20.05■□□□□ 0.8
NECAB3-213ENST00000488489 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.05■□□□□ 0.8
NECAB3-213ENST00000488489 SKA1Q96BD8 255 aa20.05■□□□□ 0.8
NECAB3-213ENST00000488489 PRR11Q96HE9 360 aaPredicted RBP20.05■□□□□ 0.8
NECAB3-213ENST00000488489 SYTL2Q9HCH5 934 aa20.05■□□□□ 0.8
NECAB3-213ENST00000488489 PCDH12Q9NPG4 1184 aa20.05■□□□□ 0.8
NECAB3-213ENST00000488489 PRSS21Q9Y6M0 314 aa20.05■□□□□ 0.8
NECAB3-213ENST00000488489 PIKFYVEQ9Y2I7 2098 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 MUC22E2RYF6 1773 aaPredicted RBP20.04■□□□□ 0.8
NECAB3-213ENST00000488489 VPS26AO75436 327 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 IPO13O94829 963 aaKnown RBP20.04■□□□□ 0.8
NECAB3-213ENST00000488489 TSPAN12O95859 305 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 CHRM3P20309 590 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 CD9P21926 228 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 METAP1P53582 386 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 DNAJB13P59910 316 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 RCN2Q14257 317 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 TRIM67Q6ZTA4 783 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 EP400NLQ6ZTU2 488 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 ALYREFQ86V81 257 aaKnown RBP20.04■□□□□ 0.8
NECAB3-213ENST00000488489 CCNYL1Q8N7R7 359 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 PHF21BQ96EK2 531 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 NAF1Q96HR8 494 aaKnown RBP20.04■□□□□ 0.8
NECAB3-213ENST00000488489 OSBPL1AQ9BXW6 950 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 ZDHHC4Q9NPG8 344 aa20.04■□□□□ 0.8
NECAB3-213ENST00000488489 PAX7P23759 505 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 LTBRP36941 435 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 SPINT3P49223 89 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 CLCN7P51798 805 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 ATP13A5Q4VNC0 1218 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 FNDC3BQ53EP0 1204 aaKnown RBP20.03■□□□□ 0.8
NECAB3-213ENST00000488489 CMPK2Q5EBM0 449 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 C9orf64Q5T6V5 341 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 TTC7BQ86TV6 843 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 CPA6Q8N4T0 437 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 AGR3Q8TD06 166 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 LRIG1Q96JA1 1093 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 DERL2Q9GZP9 239 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 CD84Q9UIB8 345 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 CRLS1Q9UJA2 301 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 HCN2Q9UL51 889 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 LRRC42Q9Y546 428 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 PLXNB3Q9ULL4 1909 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 TBC1D3BA6NDS4 549 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 C16orf96A6NNT2 1141 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 UPK3BL1B0FP48 263 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 UPK3BL2E5RIL1 263 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 SMNDC1O75940 238 aaKnown RBP eCLIP20.03■□□□□ 0.84e-6■■□□□ 12.4
NECAB3-213ENST00000488489 PYGLP06737 847 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 ZNF7P17097 686 aaPredicted RBP20.03■□□□□ 0.8
NECAB3-213ENST00000488489 MPSTP25325 297 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 PTPN5P54829 565 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 BLMHQ13867 455 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 ZNF234Q14588 700 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 EIF4HQ15056 248 aaKnown RBP20.03■□□□□ 0.8
NECAB3-213ENST00000488489 HNRNPA1L2Q32P51 320 aaKnown RBP20.03■□□□□ 0.8
NECAB3-213ENST00000488489 GPR33Q49SQ1 333 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 RPS27LQ71UM5 84 aaKnown RBP20.03■□□□□ 0.8
NECAB3-213ENST00000488489 YAF2Q8IY57 180 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 RBFAQ8N0V3 343 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 NXPE1Q8N323 547 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 ELSPBP1Q96BH3 223 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 SHCBP1LQ9BZQ2 653 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 ABCG8Q9H221 673 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 COMMD10Q9Y6G5 202 aa20.03■□□□□ 0.8
NECAB3-213ENST00000488489 ANKRD12Q6UB98 2062 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 MTHFD2P13995 350 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 VIPR1P32241 457 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 VWA5B1Q5TIE3 1220 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 HSD11B1LQ7Z5J1 315 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 RHEBL1Q8TAI7 183 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 EEF1AKMT1Q8WVE0 214 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 PLEKHG4BQ96PX9 1271 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 ATOH8Q96SQ7 321 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 TUBB6Q9BUF5 446 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 CLPBQ9H078 707 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 TMEM245Q9H330 911 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 TFB2MQ9H5Q4 396 aaKnown RBP20.02■□□□□ 0.8
NECAB3-213ENST00000488489 DENND2DQ9H6A0 471 aaPredicted RBP20.02■□□□□ 0.8
NECAB3-213ENST00000488489 SARS2Q9NP81 518 aaKnown RBP20.02■□□□□ 0.8
NECAB3-213ENST00000488489 CLDND1Q9NY35 253 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 NCKIPSDQ9NZQ3 722 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 DKK3Q9UBP4 350 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 TRMT6Q9UJA5 497 aaKnown RBP20.02■□□□□ 0.8
NECAB3-213ENST00000488489 PCDHB1Q9Y5F3 818 aa20.02■□□□□ 0.8
NECAB3-213ENST00000488489 E5RI56 91 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 LMNAP02545 664 aaKnown RBP20.02■□□□□ 0.79
NECAB3-213ENST00000488489 ALOX15P16050 662 aaPredicted RBP20.02■□□□□ 0.79
NECAB3-213ENST00000488489 RPS3P23396 243 aaKnown RBP eCLIP20.02■□□□□ 0.79
NECAB3-213ENST00000488489 GDI1P31150 447 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 ARHGEF7Q14155 803 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 PARS2Q7L3T8 475 aaKnown RBP20.02■□□□□ 0.79
NECAB3-213ENST00000488489 CPNE9Q8IYJ1 553 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 KDM1BQ8NB78 822 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 CFAP61Q8NHU2 1237 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 LKAAEAR1Q8TD35 194 aa20.02■□□□□ 0.79
NECAB3-213ENST00000488489 KIAA1191Q96A73 305 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms