RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 C10orf107Q8IVU9 208 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 FSTL5Q8N475 847 aaPredicted RBP12.62□□□□□ -0.39
NELFE-209ENST00000488426 PNPLA1Q8N8W4 532 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 NXNL1Q96CM4 212 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 MSANTD3Q96H12 275 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 SCYL1Q96KG9 808 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 P2RY13Q9BPV8 354 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 MRPL57Q9BQC6 102 aaKnown RBP12.62□□□□□ -0.39
NELFE-209ENST00000488426 MRPL46Q9H2W6 279 aaKnown RBP12.62□□□□□ -0.39
NELFE-209ENST00000488426 TMEM245Q9H330 911 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 IL26Q9NPH9 171 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 IGSF5Q9NSI5 407 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 TAS2R13Q9NYV9 303 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 B4GALT6Q9UBX8 382 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
NELFE-209ENST00000488426 ARL2BPQ9Y2Y0 163 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
NELFE-209ENST00000488426 ATXN2Q99700 1313 aaKnown RBP12.62□□□□□ -0.39
NELFE-209ENST00000488426 TBC1D3BA6NDS4 549 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 TARM1B6A8C7 271 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 SNNO75324 88 aaPredicted RBP12.61□□□□□ -0.39
NELFE-209ENST00000488426 ESR1P03372 595 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 MYL2P10916 166 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 PKMP14618 531 aaKnown RBP12.61□□□□□ -0.39
NELFE-209ENST00000488426 KCNA4P22459 653 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 LHCGRP22888 699 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 GRIA2P42262 883 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 CDKN1CP49918 316 aaPredicted RBP12.61□□□□□ -0.39
NELFE-209ENST00000488426 OCRLQ01968 901 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 DLG1Q12959 904 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 NFATC2Q13469 925 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 ARHGEF7Q14155 803 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 LRRC32Q14392 662 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 ZNF234Q14588 700 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 C6orf89Q6UWU4 347 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 FAM151BQ6UXP7 276 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 TMEM151AQ8N4L1 468 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 ZNF398Q8TD17 642 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 BIRC8Q96P09 236 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 RASSF4Q9H2L5 321 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 FAM96AQ9H5X1 160 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 ASB8Q9H765 288 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 ZDHHC4Q9NPG8 344 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 THAP1Q9NVV9 213 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 KLHL14Q9P2G3 628 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 PCDHGA2Q9Y5H1 932 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 AGAP14A8MT82 685 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 K7EQS6 105 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 TK2O00142 265 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 RHOBTB1O94844 696 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 KAT7O95251 611 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 APODP05090 189 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 PYGLP06737 847 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 RBP1P09455 135 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 CCDC166P0CW27 439 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 RALBP11234 206 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 TIMP2P16035 220 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 XPAP23025 273 aaPredicted RBP12.61□□□□□ -0.39
NELFE-209ENST00000488426 FMO4P31512 558 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 CCR3P51677 355 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 PGGT1BP53609 377 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 TIAL1Q01085 375 aaKnown RBP eCLIP12.61□□□□□ -0.39
NELFE-209ENST00000488426 PTSQ03393 145 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 GRSF1Q12849 480 aaKnown RBP eCLIP12.61□□□□□ -0.39
NELFE-209ENST00000488426 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
NELFE-209ENST00000488426 CSHL1Q14406 222 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 ELAVL3Q14576 367 aaKnown RBP12.61□□□□□ -0.39
NELFE-209ENST00000488426 ACAP2Q15057 778 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 C9orf64Q5T6V5 341 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 OR6Y1Q8NGX8 325 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 HEXDCQ8WVB3 486 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 KCNJ9Q92806 393 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 P2RY12Q9H244 342 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 MTG2Q9H4K7 406 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 SYTL2Q9HCH5 934 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 RAD18Q9NS91 495 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 PKD2L2Q9NZM6 624 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
NELFE-209ENST00000488426 XPR1Q9UBH6 696 aa12.61□□□□□ -0.39
NELFE-209ENST00000488426 PRMT5O14744 637 aaPredicted RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 TRIM13O60858 407 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 DNAJC6O75061 913 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 VPS26AO75436 327 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 C1SP09871 688 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 ZNF37AP17032 561 aaPredicted RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 ZNF7P17097 686 aaPredicted RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 RPS3P23396 243 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■■□□□ 13.8
NELFE-209ENST00000488426 GLRBP48167 497 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 SPINT3P49223 89 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 ASPHQ12797 758 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 TECRLQ5HYJ1 363 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 ICE2Q659A1 982 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 ZC3H14Q6PJT7 736 aaKnown RBP12.6□□□□□ -0.39
NELFE-209ENST00000488426 SERPINA13PQ6UXR4 307 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 DPPA4Q7L190 304 aa12.6□□□□□ -0.39
NELFE-209ENST00000488426 PIM3Q86V86 326 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms