RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ALOX15P16050 662 aaPredicted RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 XPAP23025 273 aaPredicted RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ETV3P41162 512 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 NAGLUP54802 743 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 B4GALNT1Q00973 533 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ASPHQ12797 758 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 RCN2Q14257 317 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 SPRED3Q2MJR0 410 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 GLIPR1L2Q4G1C9 344 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 LACTB2Q53H82 288 aaPredicted RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 LIPIQ6XZB0 460 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 Q6ZVL8 140 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 CLDN19Q8N6F1 224 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 FITM2Q8N6M3 262 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 LKAAEAR1Q8TD35 194 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 CCDC126Q96EE4 140 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 FAM83DQ9H4H8 585 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ZDHHC4Q9NPG8 344 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 RAD18Q9NS91 495 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 CACNA2D2Q9NY47 1150 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 MARCOQ9UEW3 520 aaPredicted RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 CD84Q9UIB8 345 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ITM2BQ9Y287 266 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 DHRS7Q9Y394 339 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 GOLGA8CPA6NN73 597 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 E5RI56 91 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 K7EQS6 105 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ZNF195O14628 629 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 NPC1O15118 1278 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 NPHS1O60500 1241 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 KERAO60938 352 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 DCTN3O75935 186 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 KIAA0754O94854 1291 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 EPHX1P07099 455 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ELFN1P0C7U0 828 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ADRB3P13945 408 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 MTHFD2P13995 350 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 CHRM3P20309 590 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 SERPINB5P36952 375 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 NSG1P42857 185 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 KIR2DL1P43626 348 aaPredicted RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 RGS19P49795 217 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 GALK1P51570 392 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ARFIP2P53365 341 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ELP6Q0PNE2 266 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 AAK1Q2M2I8 961 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 UGT3A1Q6NUS8 523 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 TRIM67Q6ZTA4 783 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 CCDC121Q6ZUS5 278 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 NUDT18Q6ZVK8 323 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 PIWIL4Q7Z3Z4 852 aaKnown RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 DSG4Q86SJ6 1040 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 SLC22A9Q8IVM8 553 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 LSMEM2Q8N112 164 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 TRAM1L1Q8N609 369 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 PPP4R1Q8TF05 950 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 SCAMP4Q969E2 229 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 L3HYPDHQ96EM0 354 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 PDLIM5Q96HC4 596 aaKnown RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 PPP1R16AQ96I34 528 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 COQ10AQ96MF6 247 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 TMEM237Q96Q45 408 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 COPS8Q99627 209 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 P2RY13Q9BPV8 354 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 SUN2Q9UH99 717 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 STON1Q9Y6Q2 735 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 EYSQ5T1H1 3165 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 MYO10Q9HD67 2058 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 F8W8V4 182 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 H3BQ06 376 aaPredicted RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 HSPA4LO95757 839 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 CHRNGP07510 517 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 IGFBP4P22692 258 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 TNFRSF4P43489 277 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 IL2P60568 153 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 CAMK2GQ13555 558 aaPredicted RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 GALNTL6Q49A17 601 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ARL13AQ5H913 290 aaPredicted RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 GPRC6AQ5T6X5 926 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 PTRHD1Q6GMV3 140 aaKnown RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 MAVSQ7Z434 540 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 MMAAQ8IVH4 418 aaKnown RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 CPNE9Q8IYJ1 553 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 NRSN1Q8IZ57 195 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ZNF781Q8N8C0 355 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 GBP7Q8N8V2 638 aaPredicted RBP9.34□□□□□ -0.91
SF3B1-211ENST00000487698 CSGALNACT1Q8TDX6 532 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 NAT14Q8WUY8 206 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 EEF1AKMT1Q8WVE0 214 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 SKA1Q96BD8 255 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 MOCOSQ96EN8 888 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 LINGO1Q96FE5 620 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ZSCAN5AQ9BUG6 496 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 SPATA16Q9BXB7 569 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 HDAC8Q9BY41 377 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 TRPV5Q9NQA5 729 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 ACSS2Q9NR19 701 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 LATS2Q9NRM7 1088 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms