RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 KIR2DS5Q14953 304 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 NR1I3Q14994 352 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
TRIM56-204ENST00000487252 BNIPLQ7Z465 357 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 DNAAF5Q86Y56 855 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 CAMK1DQ8IU85 385 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 WDTC1Q8N5D0 677 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 MR1Q95460 341 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 TUBGCP5Q96RT8 1024 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 HERPUD2Q9BSE4 406 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 TMEM121Q9BTD3 319 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 TMEM51Q9NW97 253 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 TMEM248Q9NWD8 314 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 RMND1Q9NWS8 449 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 KCTD5Q9NXV2 234 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 CPNE7Q9UBL6 633 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 NEU3Q9UQ49 428 aa11.5□□□□□ -0.57
TRIM56-204ENST00000487252 BUB1O43683 1085 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 RASSF9O75901 435 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 UBXN7O94888 489 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 SOD1P00441 154 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 F3P13726 295 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 CSNK1G2P78368 415 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 NRG1Q02297 640 aaPredicted RBP11.49□□□□□ -0.57
TRIM56-204ENST00000487252 ACOX1Q15067 660 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 CYTH1Q15438 398 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 PLEKHS1Q5SXH7 462 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 ZNF658Q5TYW1 1059 aaPredicted RBP11.49□□□□□ -0.57
TRIM56-204ENST00000487252 CACHD1Q5VU97 1274 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 FAM183BPQ6ZVS7 135 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 AVL9Q8NBF6 648 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 ZNF606Q8WXB4 792 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 EXOC2Q96KP1 924 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 NCAPGQ9BPX3 1015 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 NOL6Q9H6R4 1146 aaKnown RBP11.49□□□□□ -0.57
TRIM56-204ENST00000487252 METTL14Q9HCE5 456 aaKnown RBP11.49□□□□□ -0.57
TRIM56-204ENST00000487252 OLAHQ9NV23 265 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 EPHA6Q9UF33 1036 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
TRIM56-204ENST00000487252 PCYT1BQ9Y5K3 369 aaPredicted RBP11.49□□□□□ -0.57
TRIM56-204ENST00000487252 SEC16AO15027 2179 aa11.49□□□□□ -0.57
TRIM56-204ENST00000487252 DOCK10Q96BY6 2186 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 LRRC10BA6NIK2 292 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 USP27XA6NNY8 438 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 KIF2AO00139 706 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 RAMP2O60895 175 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 CLDN14O95500 239 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 RHOQP17081 205 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 TYRP1P17643 537 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 ZNF169Q14929 603 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 TPD52L1Q16890 204 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 E4F1Q66K89 784 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 RPUSD3Q6P087 351 aaKnown RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 FAM198BQ6UWH4 519 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 TMEM26Q6ZUK4 368 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 MRGPREQ86SM8 312 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 DSELQ8IZU8 1212 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 BCORP1Q8N888 145 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 LMO3Q8TAP4 145 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 NINJ1Q92982 152 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 DTD2Q96FN9 168 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 FER1L6-AS2Q96M78 137 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 IP6K3Q96PC2 410 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 TRIM56Q9BRZ2 755 aaKnown RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 GTPBP4Q9BZE4 634 aaKnown RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 RAB33BQ9H082 229 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 KLC2Q9H0B6 622 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 SAMSN1Q9NSI8 373 aaKnown RBP11.48□□□□□ -0.57
TRIM56-204ENST00000487252 DNAI1Q9UI46 699 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 RWDD2AQ9UIY3 292 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 TMEM98Q9Y2Y6 226 aa11.48□□□□□ -0.57
TRIM56-204ENST00000487252 TRGV8A0A0C4DH27 118 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 OR5K4A6NMS3 321 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 MEN1O00255 615 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 PMM2O15305 246 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 CTIFO43310 598 aaKnown RBP11.47□□□□□ -0.57
TRIM56-204ENST00000487252 NRDCO43847 1150 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 JCHAINP01591 159 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 TUBB4AP04350 444 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 TNNT1P13805 278 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 SLC2A4P14672 509 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 RORAP35398 523 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 CAPZBP47756 277 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 CSNK1DP48730 415 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 SLC6A3Q01959 620 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 GCNT1Q02742 428 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 DEUP1Q05D60 604 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 DPTQ07507 201 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 CDC16Q13042 620 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 KCNAB1Q14722 419 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 CNGA3Q16281 694 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 HIF1AQ16665 826 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 LONRF1Q17RB8 773 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.57
TRIM56-204ENST00000487252 SLC25A52Q3SY17 297 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 CFAP58Q5T655 872 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms