RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 RHOXF2Q9BQY4 288 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 WDR83Q9BRX9 315 aaKnown RBP19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 TRIM56Q9BRZ2 755 aaKnown RBP19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 TSPYL1Q9H0U9 437 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 IL21RQ9HBE5 538 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 TMEM9BQ9NQ34 198 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 MRPL40Q9NQ50 206 aaKnown RBP19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 RXFP3Q9NSD7 469 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 MTRF1LQ9UGC7 380 aaKnown RBP19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 CHMP2BQ9UQN3 213 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 CHUKO15111 745 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 CDK14O94921 469 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 PRSS56P0CW18 603 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 POLD2P49005 469 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 CCT8P50990 548 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 FRG1Q14331 258 aaKnown RBP19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 CRYMQ14894 314 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 KHDC1Q4VXA5 237 aaKnown RBP19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 ZNF542PQ5EBM4 170 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 TEX35Q5T0J7 233 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 STEAP4Q687X5 459 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 KCTD16Q68DU8 428 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 DBX2Q6ZNG2 339 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 CEP128Q6ZU80 1094 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 HID1Q8IV36 788 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 ZBED8Q8IZ13 594 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 FBXO36Q8NEA4 188 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 GPR150Q8NGU9 434 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 SCG3Q8WXD2 468 aaKnown RBP19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 PDXPQ96GD0 296 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 TTC1Q99614 292 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 COPS8Q99627 209 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 SLC13A1Q9BZW2 595 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 ZCCHC2Q9C0B9 1178 aaKnown RBP19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 CYP4F12Q9HCS2 524 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 TM7SF3Q9NS93 570 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 CATSPERZQ9NTU4 200 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 TRNAU1APQ9NX07 287 aaKnown RBP19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 ZC3H7BQ9UGR2 993 aaKnown RBP19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 SUFUQ9UMX1 484 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 PCDHGB2Q9Y5G2 931 aa19.16■□□□□ 0.66
PCOLCE-208ENST00000487172 CD3EAPO15446 510 aaKnown RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 PCDHGA12O60330 932 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 PIAS2O75928 621 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 RALBP11234 206 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 ZNF8P17098 575 aaPredicted RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 EPHA8P29322 1005 aaPredicted RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 ECHS1P30084 290 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 PPARGP37231 505 aaPredicted RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 PLA2G5P39877 138 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 CARSP49589 748 aaKnown RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 LIMK1P53667 647 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 SLC14A1Q13336 389 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 FASTKD3Q14CZ7 662 aaKnown RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 LONRF1Q17RB8 773 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 PYCR3Q53H96 274 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 AARS2Q5JTZ9 985 aaKnown RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 ZNF648Q5T619 568 aaPredicted RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 DOK6Q6PKX4 331 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 UNC5AQ6ZN44 842 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 MICALCLQ6ZW33 695 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 TAS2R42Q7RTR8 314 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 KANSL1Q7Z3B3 1105 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 LMNTD2Q8IXW0 634 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 SDR16C5Q8N3Y7 309 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 EIF1ADQ8N9N8 165 aaKnown RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 OR2I1PQ8NGU4 316 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 SAP25Q8TEE9 199 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 PYROXD1Q8WU10 500 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 IFT81Q8WYA0 676 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 ZNF514Q96K75 400 aaPredicted RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 TTC25Q96NG3 672 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 OR2AG1Q9H205 316 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 CARS2Q9HA77 564 aaKnown RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 PLAC1Q9HBJ0 212 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 ARFGAP3Q9NP61 516 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 SAYSD1Q9NPB0 183 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 SPASTQ9UBP0 616 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 APOBEC3BQ9UH17 382 aaKnown RBP19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 MOSPD1Q9UJG1 213 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 GPR34Q9UPC5 381 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 CSNK1G3Q9Y6M4 447 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 KNL1Q8NG31 2342 aa19.15■□□□□ 0.66
PCOLCE-208ENST00000487172 CFAP99D6REC4 459 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 MTX2O75431 263 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 MSH3P20585 1137 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 BNIP3Q12983 259 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 GTF2H3Q13889 308 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 HLTFQ14527 1009 aaKnown RBP eCLIP19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 SUZ12Q15022 739 aaKnown RBP19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 DBN1Q16643 649 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 HP1BP3Q5SSJ5 553 aaPredicted RBP19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 MRNIPQ6NTE8 343 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 NEPROQ6NW34 567 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 RD3Q7Z3Z2 195 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 RELL1Q8IUW5 271 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 ANKMY2Q8IV38 441 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 RBFAQ8N0V3 343 aa19.14■□□□□ 0.65
PCOLCE-208ENST00000487172 FSTL5Q8N475 847 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms