RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 HHEXQ03014 270 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 CFHR1Q03591 330 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 MPP3Q13368 585 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 KIR2DS5Q14953 304 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 NOMO1Q15155 1222 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 SIRPB2Q5JXA9 342 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 NKAIN2Q5VXU1 208 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 ZDHHC20Q5W0Z9 365 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 TMEM71Q6P5X7 295 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 INO80CQ6PI98 192 aaPredicted RBP18.86■□□□□ 0.61
CLIP2-206ENST00000487091 CCDC81Q6ZN84 652 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 SLC9B2Q86UD5 537 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 AVL9Q8NBF6 648 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 OR10G6Q8NH81 332 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 DTX3LQ8TDB6 740 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 USP7Q93009 1102 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 HAUS1Q96CS2 278 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 WBP1Q96G27 269 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 MRGPRX2Q96LB1 330 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 CCDC74BQ96LY2 380 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 VPS35Q96QK1 796 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 ARFGAP3Q9NP61 516 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 PDP2Q9P2J9 529 aa18.86■□□□□ 0.61
CLIP2-206ENST00000487091 PRAMEF33A0A0G2JMD5 474 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 CCDC66A2RUB6 948 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 C9orf172C9J069 976 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 KMOO15229 486 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 PRAMEF10O60809 474 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 THRAP10827 490 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 LIPCP11150 499 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 HLA-DPA1P20036 260 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 CD82P27701 267 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 CSF2RBP32927 897 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 MAPK10P53779 464 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 SLC1A5Q15758 541 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 ZNF648Q5T619 568 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-206ENST00000487091 TMEM164Q5U3C3 297 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 TTC30BQ8N4P2 665 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 AHCYL2Q96HN2 611 aaKnown RBP18.85■□□□□ 0.61
CLIP2-206ENST00000487091 OXNAD1Q96HP4 312 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-206ENST00000487091 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLIP2-206ENST00000487091 REXO2Q9Y3B8 237 aaKnown RBP18.85■□□□□ 0.61
CLIP2-206ENST00000487091 DUSP10Q9Y6W6 482 aa18.85■□□□□ 0.61
CLIP2-206ENST00000487091 SMG1Q96Q15 3661 aaKnown RBP18.85■□□□□ 0.61
CLIP2-206ENST00000487091 H7C0C1 242 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 AGRPO00253 132 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 DUX1O43812 170 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 SNX2O60749 519 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 CCL4P13236 92 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 CTNNA2P26232 953 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 PTPN7P35236 360 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 ATP5OP48047 213 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 EPHA4P54764 986 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 NAP1L1P55209 391 aaKnown RBP18.84■□□□□ 0.61
CLIP2-206ENST00000487091 CCDC181Q5TID7 509 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 WDR74Q6RFH5 385 aaPredicted RBP18.84■□□□□ 0.61
CLIP2-206ENST00000487091 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 LRRTM4Q86VH4 590 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 AGBL5Q8NDL9 886 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 RCBTB1Q8NDN9 531 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 TAAR9Q96RI9 348 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 FERMT1Q9BQL6 677 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 TIMM29Q9BSF4 260 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.84■□□□□ 0.61
CLIP2-206ENST00000487091 OSBPL8Q9BZF1 889 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 BPIFA1Q9NP55 256 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 KLC4Q9NSK0 619 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 IL17CQ9P0M4 197 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 RSPH14Q9UHP6 348 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 TMPRSS11EQ9UL52 423 aa18.84■□□□□ 0.61
CLIP2-206ENST00000487091 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.83■□□□□ 0.6
CLIP2-206ENST00000487091 PJA2O43164 708 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 ANXA9O76027 345 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 CDK14O94921 469 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 FGF3P11487 239 aaPredicted RBP18.83■□□□□ 0.6
CLIP2-206ENST00000487091 ZNF7P17097 686 aaPredicted RBP18.83■□□□□ 0.6
CLIP2-206ENST00000487091 RBL1P28749 1068 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 CSTF2P33240 577 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLIP2-206ENST00000487091 CHRNA4P43681 627 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 GEMP55040 296 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 RWDD2BP57060 319 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 ATP13A5Q4VNC0 1218 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 PCSK4Q6UW60 755 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 ZNF761Q86XN6 746 aaPredicted RBP18.83■□□□□ 0.6
CLIP2-206ENST00000487091 SLC25A41Q8N5S1 370 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 IPMKQ8NFU5 416 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 ACTL9Q8TC94 416 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 BRSK1Q8TDC3 778 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 LACRTQ9GZZ8 138 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 EPB41L1Q9H4G0 881 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 IL26Q9NPH9 171 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 PRDM8Q9NQV8 689 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 FOXJ2Q9P0K8 574 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 CPNE7Q9UBL6 633 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 SLC23A2Q9UGH3 650 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 PCDHGA3Q9Y5H0 932 aa18.83■□□□□ 0.6
CLIP2-206ENST00000487091 EFSO43281 561 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 PPFIA2O75334 1257 aa18.82■□□□□ 0.6
CLIP2-206ENST00000487091 XRCC1P18887 633 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-206ENST00000487091 SPAM1P38567 509 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms