RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 EEF1DP29692 281 aaKnown RBP4.09□□□□□ -1.75
PTCD3-216ENST00000487043 CBSP35520 551 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 IL15P40933 162 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-216ENST00000487043 MRPS5P82675 430 aaKnown RBP4.09□□□□□ -1.75
PTCD3-216ENST00000487043 TFAP4Q01664 338 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 GAD2Q05329 585 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 ADIPOQQ15848 244 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 SLC15A2Q16348 729 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 USP41Q3LFD5 358 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 CDONQ4KMG0 1287 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 C9orf152Q5JTZ5 239 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 LRIF1Q5T3J3 769 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 HECTD3Q5T447 861 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 PLPPR4Q7Z2D5 763 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 ATG9AQ7Z3C6 839 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 GALNTL5Q7Z4T8 443 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 NBPF5PQ86XG9 351 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-216ENST00000487043 GALNT13Q8IUC8 556 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 DENND6AQ8IWF6 608 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 ZDHHC23Q8IYP9 409 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-216ENST00000487043 CEP76Q8TAP6 659 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 VPS33AQ96AX1 596 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 TTC14Q96N46 770 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 TUBB6Q9BUF5 446 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 KIFC3Q9BVG8 833 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 B3GNT4Q9C0J1 378 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 OSGEPL1Q9H4B0 414 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 WDR26Q9H7D7 661 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 IL1RAPL2Q9NP60 686 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 GPR108Q9NPR9 543 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 DDX4Q9NQI0 724 aaKnown RBP4.09□□□□□ -1.75
PTCD3-216ENST00000487043 RNF146Q9NTX7 359 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 WSB2Q9NYS7 404 aaPredicted RBP4.09□□□□□ -1.75
PTCD3-216ENST00000487043 C5AR2Q9P296 337 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 CMAHPQ9Y471 501 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 INSL6Q9Y581 213 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 SLC4A4Q9Y6R1 1079 aa4.09□□□□□ -1.75
PTCD3-216ENST00000487043 SCN7AQ01118 1682 aa4.09□□□□□ -1.76
PTCD3-216ENST00000487043 FAM170AA1A519 330 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 LRRC3CA6NJW4 275 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 AKR1B15C9JRZ8 316 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 PAPSS1O43252 624 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 TBCAO75347 108 aaKnown RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 AVILO75366 819 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 PSMD10O75832 226 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 C1QL1O75973 258 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 MTA2O94776 668 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 CLDN7O95471 211 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 SERPINB2P05120 415 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ABCB1P08183 1280 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 MMP2P08253 660 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 C4AP0C0L4 1744 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ANXA7P20073 488 aaKnown RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 MX1P20591 662 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 PROZP22891 400 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 TBXAS1P24557 533 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 SUOXP51687 545 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 GHRHRQ02643 423 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 CFHR1Q03591 330 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 LPIN1Q14693 890 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 C2orf68Q2NKX9 166 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 SMTNL2Q2TAL5 461 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 CCDC152Q4G0S7 254 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 C6orf10Q5SRN2 563 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 KIAA1614Q5VZ46 1190 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 TMEM198Q66K66 360 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 TMEM71Q6P5X7 295 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ZNF782Q6ZMW2 699 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ZNF793Q6ZN11 406 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 DNAJB7Q7Z6W7 309 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 DEFB132Q7Z7B7 95 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 SLFN11Q7Z7L1 901 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 RNF168Q8IYW5 571 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 GPATCH11Q8N954 259 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 CARMIL3Q8ND23 1372 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 RTL9Q8NET4 1388 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 Q8NFD4 153 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 OR6J1Q8NGC5 347 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 OR8K5Q8NH50 307 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 NSMCE1Q8WV22 266 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 SNAPC3Q92966 411 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 IGSF8Q969P0 613 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ZNF653Q96CK0 615 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 TMCO6Q96DC7 493 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 RRNAD1Q96FB5 475 aaKnown RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ZNF333Q96JL9 665 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 HARBI1Q96MB7 349 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 SLITRK1Q96PX8 696 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 FIZ1Q96SL8 496 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 SEPT5Q99719 369 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ADPGKQ9BRR6 497 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 PUS3Q9BZE2 481 aaKnown RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 NPFFR1Q9GZQ6 430 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 RSPH9Q9H1X1 276 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 THSD1Q9NS62 852 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 DECR2Q9NUI1 292 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 PAG1Q9NWQ8 432 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ANKRD10Q9NXR5 420 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms