RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SLC6A4P31645 630 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 GCLMP48507 274 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SGSHP51688 502 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 RAD23BP54727 409 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 GSCP56915 257 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CD83Q01151 205 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SULT2A1Q06520 285 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 ENPEPQ07075 957 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 ADIGQ0VDE8 80 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 BST2Q10589 180 aaKnown RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SLC12A1Q13621 1099 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 LAMB3Q13751 1172 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 BLMHQ13867 455 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 NAA25Q14CX7 972 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 RBBP5Q15291 538 aaKnown RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 GOLGA7BQ2TAP0 167 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 C3orf38Q5JPI3 329 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 PITRM1Q5JRX3 1037 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 COLEC12Q5KU26 742 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 MSANTD2Q6P1R3 559 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 NEK5Q6P3R8 708 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 WDR73Q6P4I2 378 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SHQ1Q6PI26 577 aaKnown RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CORO6Q6QEF8 472 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 ZNF574Q6ZN55 896 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 RGS9BPQ6ZS82 235 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 DCP2Q8IU60 420 aaKnown RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 FAM114A1Q8IWE2 563 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SLC4A11Q8NBS3 891 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 LINC00301Q8NCQ3 95 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 MOSPD2Q8NHP6 518 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 TAS1R2Q8TE23 839 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 FAM216AQ8WUB2 273 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 OR8D1Q8WZ84 308 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 NDRG1Q92597 394 aaKnown RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 PTPRN2Q92932 1015 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 USP7Q93009 1102 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 FAM131CQ96AQ9 280 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 APOLD1Q96LR9 279 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CCNL2Q96S94 520 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 GAL3ST1Q99999 423 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 ACAT2Q9BWD1 397 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 EHD1Q9H4M9 534 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SYNCQ9H7C4 482 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CNGB3Q9NQW8 809 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CISHQ9NSE2 258 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 TBCCD1Q9NVR7 557 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 NLGN3Q9NZ94 848 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 TJP2Q9UDY2 1190 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SLCO3A1Q9UIG8 710 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 SATB2Q9UPW6 733 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 PCDHGB5Q9Y5G0 923 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 PCDHGA8Q9Y5G5 932 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 NBASA2RRP1 2371 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 NYNRINQ9P2P1 1898 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 TPP1O14773 563 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 SCAMP1O15126 338 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 POLR2DO15514 142 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 ZSCAN9O15535 394 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 LEFTY1O75610 366 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 PIAS2O75928 621 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 LUC7L3O95232 432 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 IGLV3-27P01718 113 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 CELA3AP09093 270 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 PYGMP11217 842 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 ZNF18P17022 549 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 PAMP19021 973 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 SYT1P21579 422 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 RPL13P26373 211 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 CASP1P29466 404 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 AKT2P31751 481 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 GTF2H1P32780 548 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 DRD3P35462 400 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 AFMP43652 599 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 ARFIP1P53367 373 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 OXCT1P55809 520 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 ARL4CP56559 192 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 DAOAP59103 153 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 HNRNPKP61978 463 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 YWHAEP62258 255 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 RPS24P62847 133 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 PPARDQ03181 441 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 PPP3CAQ08209 521 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 STK4Q13043 487 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 CUL4BQ13620 913 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 MAJINQ3KP22 176 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 ZSCAN23Q3MJ62 389 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 POM121L1PQ3SYA9 428 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 MS4A13Q5J8X5 152 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 C1orf220Q5T0J3 134 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 AADACL4Q5VUY2 407 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 KRT39Q6A163 491 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 RPUSD3Q6P087 351 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 RBM44Q6ZP01 1051 aaKnown RBP6.83□□□□□ -1.32
HDAC3-209ENST00000486618 USP53Q70EK8 1073 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 CBLL1Q75N03 491 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 BHLHA9Q7RTU4 235 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 BNIPLQ7Z465 357 aa6.83□□□□□ -1.32
HDAC3-209ENST00000486618 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms