RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CLCQ05315 142 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 SLC34A1Q06495 639 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 UGT3A2Q3SY77 523 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 GRAMD4Q6IC98 578 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 ZSWIM9Q86XI8 627 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 MYLK4Q86YV6 388 aaPredicted RBP20.18■□□□□ 0.82
HPS3-206ENST00000486530 FBXW8Q8N3Y1 598 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 ECHDC3Q96DC8 303 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 PDLIM5Q96HC4 596 aaKnown RBP20.18■□□□□ 0.82
HPS3-206ENST00000486530 BBS2Q9BXC9 721 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 CPEB1Q9BZB8 566 aaKnown RBP20.18■□□□□ 0.82
HPS3-206ENST00000486530 TBC1D14Q9P2M4 693 aa20.18■□□□□ 0.82
HPS3-206ENST00000486530 GLYATL1P3A0A0U1RQE8 302 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 LRRC14BA6NHZ5 514 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 AZIN1O14977 448 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 CA3P07451 260 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 BPIP17213 487 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 PTPN5P54829 565 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 DMC1Q14565 340 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 MAPRE2Q15555 327 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 ZNF77Q15935 545 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 SLC5A9Q2M3M2 681 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 KANK2Q63ZY3 851 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 PTRHD1Q6GMV3 140 aaKnown RBP20.17■□□□□ 0.82
HPS3-206ENST00000486530 ASTLQ6HA08 431 aaPredicted RBP20.17■□□□□ 0.82
HPS3-206ENST00000486530 USP45Q70EL2 814 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 IRF7Q92985 503 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 RCN3Q96D15 328 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 NSUN5Q96P11 429 aaKnown RBP20.17■□□□□ 0.82
HPS3-206ENST00000486530 SARS2Q9NP81 518 aaKnown RBP20.17■□□□□ 0.82
HPS3-206ENST00000486530 IL26Q9NPH9 171 aa20.17■□□□□ 0.82
HPS3-206ENST00000486530 FKBP6O75344 327 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 GPC4O75487 556 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 CD1EP15812 388 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 ACRV1P26436 265 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 MTTPP55157 894 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 GEN1Q17RS7 908 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 GPR33Q49SQ1 333 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 ELMSAN1Q6PJG2 1045 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 CYHR1Q6ZMK1 362 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 LARP4Q71RC2 724 aaKnown RBP eCLIP20.16■□□□□ 0.82
HPS3-206ENST00000486530 GPSM1Q86YR5 675 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 DSELQ8IZU8 1212 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 TRPC4APQ8TEL6 797 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 JADE3Q92613 823 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 VOPP1Q96AW1 172 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 SUV39H2Q9H5I1 410 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 EFCAB1Q9HAE3 211 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 SPHK2Q9NRA0 654 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 ZMYM5Q9UJ78 669 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 ANGPTL2Q9UKU9 493 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 PPIL1Q9Y3C6 166 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 DNAJC15Q9Y5T4 150 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 NPIPB15A6NHN6 443 aaPredicted RBP20.16■□□□□ 0.82
HPS3-206ENST00000486530 SNX2O60749 519 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 TBX10O75333 385 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 PDE5AO76074 875 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 BMP1P13497 986 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 ATP4BP51164 291 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 CCNHP51946 323 aaPredicted RBP20.16■□□□□ 0.82
HPS3-206ENST00000486530 ECT2LQ008S8 904 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 PPP1R3AQ16821 1122 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 CARD16Q5EG05 197 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 TPRG1Q6ZUI0 275 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 ZNF483Q8TF39 744 aaPredicted RBP20.16■□□□□ 0.82
HPS3-206ENST00000486530 TWIST2Q8WVJ9 160 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 SCRN2Q96FV2 425 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 ZNF641Q96N77 438 aaPredicted RBP20.16■□□□□ 0.82
HPS3-206ENST00000486530 SERPINI1Q99574 410 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 NUDT4Q9NZJ9 180 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 CRLS1Q9UJA2 301 aa20.16■□□□□ 0.82
HPS3-206ENST00000486530 A0A1W2PQ67 120 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 IQCF5A8MTL0 148 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 POP4O95707 220 aaKnown RBP20.15■□□□□ 0.82
HPS3-206ENST00000486530 TYRP14679 529 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 TCF3P15923 654 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 AP2B1P63010 937 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 SHHQ15465 462 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 PRSS36Q5K4E3 855 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 AAGABQ6PD74 315 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 PGAM4Q8N0Y7 254 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 DTX3LQ8TDB6 740 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 OTUB2Q96DC9 234 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 MCCC1Q96RQ3 725 aaPredicted RBP20.15■□□□□ 0.82
HPS3-206ENST00000486530 ZDHHC6Q9H6R6 413 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 PLXNB3Q9ULL4 1909 aa20.15■□□□□ 0.82
HPS3-206ENST00000486530 ANKRD12Q6UB98 2062 aa20.14■□□□□ 0.82
HPS3-206ENST00000486530 PPP6CO00743 305 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 PER2O15055 1255 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 BNIP3LO60238 219 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 MLYCDO95822 493 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 VHLP40337 213 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 SESN3P58005 492 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 ERVK-21P61565 698 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 PTK2BQ14289 1009 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 CHRNA6Q15825 494 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 CRTC1Q6UUV9 634 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 ADAMTSL2Q86TH1 951 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 TSPAN33Q86UF1 283 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 CIPCQ9C0C6 399 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms