RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LY6DQ14210 128 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 INPP5AQ14642 412 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 KYNUQ16719 465 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 UGP2Q16851 508 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 CCDC38Q502W7 563 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 INO80DQ53TQ3 878 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 FAM182AQ5T1J6 154 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 ENPP7Q6UWV6 458 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 ARHGEF18Q6ZSZ5 1173 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 GPR155Q7Z3F1 870 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 UMODL1-AS1Q8N2C9 162 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 ZNF843Q8N446 348 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 ZNF248Q8NDW4 579 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 DENND6BQ8NEG7 585 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 OR2W6PQ8NHA6 318 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 PYROXD1Q8WU10 500 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 HTR3CQ8WXA8 447 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 OR1E3Q8WZA6 343 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 SPATA13Q96N96 652 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 PPP1R2P1Q96PQ5 205 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 APOOQ9BUR5 198 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 LGR4Q9BXB1 951 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 CENPHQ9H3R5 247 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 RETREG1Q9H6L5 497 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 CATSPERBQ9H7T0 1116 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 XAB2Q9HCS7 855 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 ETNK2Q9NVF9 386 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 SENP1Q9P0U3 644 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 SPASTQ9UBP0 616 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 UBA2Q9UBT2 640 aaPredicted RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 SLC24A2Q9UI40 661 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 NOVA2Q9UNW9 492 aaKnown RBP9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 DOPEY1Q5JWR5 2465 aa9.37□□□□□ -0.91
TMEM39A-208ENST00000486159 ATMQ13315 3056 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 A0A1W2PQM1 296 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 TMEM202A6NGA9 273 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 ERI2A8K979 691 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 LMO7DNF2Z398 122 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 AP3B1O00203 1094 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 TPP1O14773 563 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PSMD3O43242 534 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 EFSO43281 561 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PRAMEF11O60813 436 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 DXOO77932 396 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 ACSL3O95573 720 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 FUCA1P04066 466 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 ANXA6P08133 673 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 ERCC2P18074 760 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 MDH1P40925 334 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 HK3P52790 923 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 GEMIN4P57678 1058 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 YBEYP58557 167 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 BASP1P80723 227 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PPARDQ03181 441 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 GBE1Q04446 702 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 SLC10A2Q12908 348 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PDIA2Q13087 525 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 SEMA5AQ13591 1074 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 LRRC14Q15048 493 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 TGIF1Q15583 401 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PARP6Q2NL67 630 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 KLHL38Q2WGJ6 581 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 KIAA1614Q5VZ46 1190 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 MACC1Q6ZN28 852 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 TMPRSS9Q7Z410 1059 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 CCNJLQ8IV13 435 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 SDR16C5Q8N3Y7 309 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 FAM174AQ8TBP5 190 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 CCDC74AQ96AQ1 378 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 HDAC11Q96DB2 347 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PDXPQ96GD0 296 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 ZNF578Q96N58 590 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 SLC46A1Q96NT5 459 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 SMIM14Q96QK8 99 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 CPEB1Q9BZB8 566 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 SLC13A1Q9BZW2 595 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 DKK3Q9UBP4 350 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 TRHDEQ9UKU6 1024 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 ATXN7L1Q9ULK2 861 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 PADI4Q9UM07 663 aa9.36□□□□□ -0.91
TMEM39A-208ENST00000486159 CXorf51AA0A1B0GTR3 108 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 TLDC2A0PJX2 215 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 TSPAN11A1L157 253 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 CDRT15L2A8MXV6 281 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 DFFAO00273 331 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 NTN3O00634 580 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 MFSD11O43934 449 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 LZTS3O60299 673 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 RECQL5O94762 991 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 TNFSF15O95150 251 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 XPAP23025 273 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 MMP12P39900 470 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 MMP13P45452 471 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 GYS2P54840 703 aa9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 SRP54P61011 504 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-208ENST00000486159 MAGOHP61326 146 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms