RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 ACRV1P26436 265 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 SPRP35270 261 aaPredicted RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 CCNFP41002 786 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 MAGEA9P43362 315 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 CD151P48509 253 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 CLCN5P51795 746 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 ADARP55265 1226 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 PPP2CBP62714 309 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 PPP2CAP67775 309 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 B4GALNT1Q00973 533 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 CACNA1BQ00975 2339 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 TIAL1Q01085 375 aaKnown RBP eCLIP11.22□□□□□ -0.61
SND1-212ENST00000485871 DNAJC3Q13217 504 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 ITGA9Q13797 1035 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 MAP7D1Q3KQU3 841 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 AARS2Q5JTZ9 985 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 RBM20Q5T481 1227 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 ANO7Q6IWH7 933 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 KIAA1161Q6NSJ0 714 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 NEK5Q6P3R8 708 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 RGS9BPQ6ZS82 235 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 TAX1BP1Q86VP1 789 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 HORMAD1Q86X24 394 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 DCLK2Q8N568 766 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 CCDC197Q8NCU1 140 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 TSTD1Q8NFU3 115 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 OR14C36Q8NHC7 312 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 GABPB2Q8TAK5 448 aaPredicted RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 CKAP2Q8WWK9 683 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 ASB12Q8WXK4 309 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 AP2M1Q96CW1 435 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 SERAC1Q96JX3 654 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 BIRC8Q96P09 236 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 KLF6Q99612 283 aaPredicted RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 ZSCAN5AQ9BUG6 496 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 RIOK2Q9BVS4 552 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 TXNDC16Q9P2K2 825 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 CNOT6Q9ULM6 557 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 CORO1CQ9ULV4 474 aaPredicted RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 NCKAP1Q9Y2A7 1128 aa11.22□□□□□ -0.61
SND1-212ENST00000485871 RRP15Q9Y3B9 282 aaKnown RBP11.22□□□□□ -0.61
SND1-212ENST00000485871 FAM95CA0A1B0GW59 222 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 A0A1W2PQU0 124 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 K7ESM1 405 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 NEMP1O14524 444 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 SGTAO43765 313 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 OR1I1O60431 355 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 KRT38O76015 456 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 PCDH8O95206 1070 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 APBB3O95704 486 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 ACADMP11310 421 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 AOC1P19801 751 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.619e-10■■■□□ 17.3
SND1-212ENST00000485871 TEAD1P28347 426 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 TTPAP49638 278 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 CORO7P57737 925 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 RPS21P63220 83 aaKnown RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 SLC18A2Q05940 514 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 SFSWAPQ12872 951 aaKnown RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 ZKSCAN8Q15776 578 aaPredicted RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 WSCD2Q2TBF2 565 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 ZNF284Q2VY69 593 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 KHDC1Q4VXA5 237 aaKnown RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 SETMARQ53H47 684 aaPredicted RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 CTSL3PQ5NE16 218 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 GPRC6AQ5T6X5 926 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 RNF187Q5TA31 235 aaPredicted RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 MROH9Q5TGP6 573 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 LYPLAL1Q5VWZ2 237 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 SDCCAG8Q86SQ7 713 aaPredicted RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 TRIM69Q86WT6 500 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 CAMKK1Q8N5S9 505 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 OTUD6BQ8N6M0 293 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 DDHD1Q8NEL9 900 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 GANCQ8TET4 914 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 BTN2A2Q8WVV5 523 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 ULK4Q96C45 1275 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 ATXN7L3BQ96GX2 97 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 SEC16BQ96JE7 1060 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 CABS1Q96KC9 395 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 NDNQ99608 321 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 OLFM1Q99784 485 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 AARSD1Q9BTE6 412 aaKnown RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 BOCQ9BWV1 1114 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 SPATA16Q9BXB7 569 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 SGK2Q9HBY8 427 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 KCTD5Q9NXV2 234 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 ZDHHC3Q9NYG2 299 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 WSB2Q9NYS7 404 aaPredicted RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.21□□□□□ -0.61
SND1-212ENST00000485871 CRLS1Q9UJA2 301 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 CRYL1Q9Y2S2 319 aa11.21□□□□□ -0.61
SND1-212ENST00000485871 TNRC6BQ9UPQ9 1833 aaKnown RBP11.21□□□□□ -0.62
SND1-212ENST00000485871 MYO15AQ9UKN7 3530 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 TP53BP1Q12888 1972 aaPredicted RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 DCHS1Q96JQ0 3298 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 IGHV1OR15-9A0A0B4J2B8 117 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms