RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 TNIP1Q15025 636 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 MMEL1Q495T6 779 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 PAPPA-AS1Q5QFB9 102 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 NAA35Q5VZE5 725 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 FAM122CQ6P4D5 195 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 CYP26C1Q6V0L0 522 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 B3GNT6Q6ZMB0 384 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 USP43Q70EL4 1123 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 ZNF771Q7L3S4 317 aaPredicted RBP4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 ZNF441Q8N8Z8 693 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 TANKQ92844 425 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 UBXN10Q96LJ8 280 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 SCLT1Q96NL6 688 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 MXD3Q9BW11 206 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 EVA1AQ9H8M9 152 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 C17orf75Q9HAS0 396 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 C20orf141Q9NUB4 165 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 MDFICQ9P1T7 246 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 HSPB7Q9UBY9 170 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 POLLQ9UGP5 575 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 PCDHAC2Q9Y5I4 1007 aa4.6□□□□□ -1.67
SMARCC1-207ENST00000485833 RFPL2O75678 378 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 MT-CYBP00156 380 aaPredicted RBP4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 DGKAP23743 735 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 NLRP5P59047 1200 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 ACSM2AQ08AH3 577 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 TROAPQ12815 778 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 ZBTB17Q13105 803 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 HIST2H2ACQ16777 129 aaPredicted RBP4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 TCTN1Q2MV58 587 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 TXNDC8Q6A555 127 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 DSTYKQ6XUX3 929 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 CCNI2Q6ZMN8 369 aaPredicted RBP4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 C9orf139Q6ZV77 190 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 MTSS1LQ765P7 747 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 BEST2Q8NFU1 509 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 SPATA22Q8NHS9 363 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 NEK9Q8TD19 979 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 CEMIPQ8WUJ3 1361 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 ZNF570Q96NI8 536 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 GUCD1Q96NT3 240 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 NODALQ96S42 347 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 FUZQ9BT04 418 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 HAUS8Q9BT25 410 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 ESRP2Q9H6T0 727 aaKnown RBP4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 MAGEE1Q9HCI5 957 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 SLC25A10Q9UBX3 287 aaPredicted RBP4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 VDAC3Q9Y277 283 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 FAM96BQ9Y3D0 163 aa4.59□□□□□ -1.67
SMARCC1-207ENST00000485833 IBTKQ9P2D0 1353 aaPredicted RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 MID1O15344 667 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 CNTFP26441 200 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 VAMP2P63027 116 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 RNPS1Q15287 305 aaKnown RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 KRTAP24-1Q3LI83 254 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 SGO1Q5FBB7 561 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 ANKRD54Q6NXT1 300 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 CPLX2Q6PUV4 134 aaKnown RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 GSG1LQ6UXU4 331 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 LINGO2Q7L985 606 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 RRM2BQ7LG56 351 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 DHX40Q8IX18 779 aaKnown RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 SLC35F3Q8IY50 421 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 ZNF34Q8IZ26 560 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 DSELQ8IZU8 1212 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 ZCCHC9Q8N567 271 aaKnown RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 ZCCHC10Q8TBK6 192 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 FIG4Q92562 907 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 TMEM19Q96HH6 336 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 MAELQ96JY0 434 aaKnown RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 KXD1Q9BQD3 176 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 LBHD1Q9BQE6 289 aaPredicted RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 HEMGNQ9BXL5 484 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 BPIFA1Q9NP55 256 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 MKKSQ9NPJ1 570 aaPredicted RBP4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 CNGB3Q9NQW8 809 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 C1RLQ9NZP8 487 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 STON1Q9Y6Q2 735 aa4.58□□□□□ -1.68
SMARCC1-207ENST00000485833 MAP3K15Q6ZN16 1313 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 A0A0G2JPF8 293 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 TEX13CA0A0J9YWL9 993 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 HNRNPCL3B7ZW38 293 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 HNRNPCL1O60812 293 aaKnown RBP4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 PLGP00747 810 aaPredicted RBP4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 TFP02787 698 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 HNRNPCL4P0DMR1 293 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 IRF1P10914 325 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 RAD23BP54727 409 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 UFM1P61960 85 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 FKBP1BP68106 108 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 ARL16Q0P5N6 197 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 TEFQ10587 303 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 SREBF2Q12772 1141 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 PPP2R5BQ15173 497 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 WDR73Q6P4I2 378 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 SFR1Q86XK3 245 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 LMNTD1Q8N9Z9 388 aa4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 LNX1Q8TBB1 728 aaPredicted RBP4.57□□□□□ -1.68
SMARCC1-207ENST00000485833 CD101Q93033 1021 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms